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NC_070896.1__YP_010663376.1__PP997_gp28__00028
Bact-VirNC_070896.1__YP_010663376.1__PP997_gp28__00028
Identity
- Accession:
- NC_070896 ↗
- Kingdom:
- phage
Quality
79.5
mean pLDDT
Taxonomy
TaxID: 2762389
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-204
Domain cluster:
rep: MH479923.1__AXH46490.1__SEA_ROBINSPARKLES_41__00041__D278-455
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cewA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 32.0 | 4.01e-01 | 90.4% | 80.9% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 30.0 | 4.08e-01 | 71.1% | 91.4% |
| 3rykA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 40.0 | 4.12e-01 | 100.0% | 72.0% |
| 1opoA02 | 2.60.40.1780 | Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein | 0.59 | 33.0 | 4.29e-01 | 100.0% | 98.1% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 36.0 | 4.04e-01 | 100.0% | 79.0% |
| 1nxmA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 39.0 | 3.91e-01 | 100.0% | 63.9% |
| 2pn5A10 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.58 | 40.0 | 4.46e-01 | 82.9% | 88.4% |
| 1tq5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 32.0 | 4.15e-01 | 99.5% | 93.5% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 30.0 | 3.92e-01 | 84.0% | 87.9% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 32.0 | 4.20e-01 | 96.3% | 98.1% |
| 3bpsA02 | 2.60.120.690 | Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 | 0.56 | 42.0 | 4.61e-01 | 100.0% | 96.0% |
| 2ozjA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 31.0 | 4.00e-01 | 81.3% | 93.6% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 30.0 | 3.97e-01 | 78.6% | 98.0% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 31.0 | 3.82e-01 | 78.6% | 87.7% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 4.08e-01 | 82.9% | 99.1% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 29.0 | 3.48e-01 | 72.2% | 79.4% |
| 1l9nA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.99e-01 | 82.9% | 100.0% |
| 7d9cA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 4.01e-01 | 82.4% | 96.9% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 28.0 | 3.43e-01 | 81.3% | 86.4% |
| 3kt7A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 44.0 | 4.02e-01 | 93.0% | 88.6% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 29.0 | 3.50e-01 | 70.1% | 84.1% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 29.0 | 3.53e-01 | 80.2% | 87.4% |
| 1vj2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 30.0 | 3.72e-01 | 78.6% | 95.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3798428 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 34.0 | 4.66e-01 | 78.1% | 100.0% |
| 5044775 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 36.0 | 4.74e-01 | 86.6% | 98.1% |
| 5047632 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.63 | 37.0 | 4.81e-01 | 76.5% | 100.0% |
| 1392686 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.63 | 45.0 | 4.91e-01 | 82.4% | 88.3% |
| 1713379 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.62 | 36.0 | 4.44e-01 | 87.2% | 92.9% |
| 4182351 | 11.1.1.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Reeler | 0.62 | 39.0 | 4.53e-01 | 82.4% | 87.4% |
| 4954876 | 11.1.5.132 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF11 | 0.62 | 39.0 | 4.79e-01 | 82.9% | 99.2% |
| 3910447 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.59 | 38.0 | 4.49e-01 | 94.7% | 93.1% |
| 355456 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 30.0 | 3.92e-01 | 84.0% | 87.9% |
| 4996864 | 10.12.1.4 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › dTDP_sugar_isom | 0.57 | 30.0 | 3.20e-01 | 78.6% | 54.7% |
| 3635518 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.57 | 37.0 | 4.45e-01 | 81.3% | 100.0% |
| 4279392 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 29.0 | 3.91e-01 | 81.8% | 95.8% |
| 5037452 | 10.12.1.22 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI | 0.55 | 50.0 | 4.43e-01 | 100.0% | 82.2% |
| 5039236 | 10.1.2.191 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM60 | 0.55 | 38.0 | 4.42e-01 | 86.6% | 95.7% |
| 3892209 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.52 | 35.0 | 3.99e-01 | 99.5% | 91.9% |
| 5048934 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 28.0 | 3.67e-01 | 70.1% | 93.2% |
| 4997177 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 30.0 | 3.73e-01 | 80.2% | 91.3% |
D2
high
residues 212-334
Domain cluster:
rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00003__D17-151