←Back to structures
NC_070897.1__YP_010663454.1__PP998_gp37__00037
Bact-VirNC_070897.1__YP_010663454.1__PP998_gp37__00037
Identity
- Accession:
- NC_070897 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 95-229
Domain cluster:
rep: NC_020158__YP_007378970.1__HVTV1-65__00064__D54-164
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10263.16 best | SprT-like | 44.8 | 1.40e-11 | 76.3% | 73.8% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jiuA00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.78 | 57.0 | 6.37e-01 | 74.8% | 97.1% |
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.77 | 58.0 | 6.54e-01 | 78.5% | 100.0% |
| 3dteA01 | 1.10.10.2910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 50.0 | 5.33e-01 | 85.2% | 88.9% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.63 | 34.0 | 3.86e-01 | 97.8% | 67.6% |
| 5jolA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.62 | 36.0 | 4.38e-01 | 73.3% | 92.7% |
| 1iv8A04 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.61 | 30.0 | 3.49e-01 | 85.2% | 62.9% |
| 2f33A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 36.0 | 4.32e-01 | 83.7% | 89.7% |
| 2be4A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 39.0 | 4.63e-01 | 86.7% | 98.9% |
| 2ncoA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 40.0 | 4.48e-01 | 78.5% | 89.2% |
| 4l63A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.57 | 49.0 | 3.95e-01 | 91.1% | 69.5% |
| 2a0uB01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.57 | 39.0 | 3.68e-01 | 81.5% | 58.1% |
| 3mfnB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 42.0 | 4.38e-01 | 78.5% | 99.2% |
| 2etsA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.56 | 33.0 | 3.53e-01 | 86.7% | 67.0% |
| 2mhhA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 34.0 | 3.89e-01 | 84.4% | 83.3% |
| 3fxhA00 | 1.20.120.600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Crystal structure from the mobile metagenome of halifax harbour sewage outfall | 0.54 | 38.0 | 4.13e-01 | 72.6% | 98.2% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.53 | 33.0 | 3.73e-01 | 87.4% | 82.4% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 32.0 | 3.60e-01 | 75.6% | 78.6% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.51 | 33.0 | 3.27e-01 | 100.0% | 59.2% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 37.0 | 3.97e-01 | 74.8% | 100.0% |
| 3d2mA01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.51 | 42.0 | 3.38e-01 | 89.6% | 76.6% |
| 4r60A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 43.0 | 3.59e-01 | 91.1% | 95.3% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055672 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.84 | 59.0 | 6.65e-01 | 71.1% | 98.1% |
| 3970171 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.84 | 59.0 | 6.63e-01 | 71.1% | 100.0% |
| 4042388 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.84 | 59.0 | 6.62e-01 | 71.1% | 100.0% |
| 3838568 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.82 | 58.0 | 6.59e-01 | 74.8% | 93.3% |
| 4074514 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.82 | 63.0 | 6.83e-01 | 79.3% | 98.3% |
| 3946602 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.82 | 62.0 | 6.61e-01 | 78.5% | 93.3% |
| 3386105 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.81 | 57.0 | 5.87e-01 | 72.6% | 74.6% |
| 3988176 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.80 | 59.0 | 6.57e-01 | 76.3% | 95.5% |
| 5016438 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.80 | 59.0 | 5.59e-01 | 75.6% | 93.5% |
| 4135843 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.79 | 60.0 | 6.48e-01 | 78.5% | 93.9% |
| 4969797 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.79 | 58.0 | 6.24e-01 | 75.6% | 97.4% |
| 1030676 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.78 | 57.0 | 6.37e-01 | 74.8% | 97.1% |
| 4972072 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.78 | 55.0 | 5.19e-01 | 72.6% | 88.7% |
| 3957469 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.77 | 58.0 | 5.61e-01 | 77.8% | 96.7% |
| 4988454 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.77 | 55.0 | 6.35e-01 | 74.1% | 100.0% |
| 3782282 | 2498.1.1.36 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › WLM | 0.76 | 53.0 | 5.26e-01 | 70.4% | 84.3% |
| 1314423 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.76 | 58.0 | 6.37e-01 | 78.5% | 99.1% |
| 1030677 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.76 | 59.0 | 6.43e-01 | 80.7% | 97.3% |
| 5010190 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.75 | 55.0 | 4.72e-01 | 75.6% | 72.7% |
| 5061805 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.74 | 55.0 | 6.04e-01 | 80.7% | 93.6% |
| 5077870 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.74 | 56.0 | 4.70e-01 | 78.5% | 79.1% |
| 4511318 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.73 | 53.0 | 4.26e-01 | 74.1% | 53.2% |
| 3519421 | 2498.1.1.62 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M76 | 0.73 | 50.0 | 4.62e-01 | 70.4% | 81.8% |
| 3405450 | 2498.1.1.62 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M76 | 0.73 | 50.0 | 4.21e-01 | 70.4% | 63.6% |
| 5025453 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.72 | 56.0 | 5.69e-01 | 80.7% | 100.0% |
| 4131753 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.72 | 54.0 | 4.67e-01 | 77.0% | 69.0% |
| 4644374 | 2498.1.1.26 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 | 0.71 | 52.0 | 4.45e-01 | 74.8% | 65.9% |
| 4031195 | 2498.1.1.50 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Zn_peptidase_2 | 0.71 | 54.0 | 5.14e-01 | 78.5% | 84.5% |
| 3868678 | 2498.1.1.65 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MATCAP | 0.67 | 54.0 | 4.02e-01 | 83.7% | 47.6% |
| 3754954 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 55.0 | 4.55e-01 | 85.9% | 69.6% |
| 185182 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.66 | 50.0 | 5.32e-01 | 85.9% | 88.2% |
| 3937038 | 181.1.1.6 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PCM1_C | 0.62 | 44.0 | 4.44e-01 | 73.3% | 72.5% |
| 3689741 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.61 | 54.0 | 4.26e-01 | 95.6% | 74.3% |
| 1154535 | 108.1.1.112 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5 | 0.60 | 36.0 | 3.70e-01 | 84.4% | 60.3% |
| None | — | 0.58 | 47.0 | 3.98e-01 | 86.7% | 65.7% | |
| 3962296 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.57 | 46.0 | 3.89e-01 | 86.7% | 63.5% |
| 3607719 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.56 | 32.0 | 3.95e-01 | 94.8% | 88.2% |
| 3509444 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.56 | 44.0 | 3.58e-01 | 84.4% | 82.3% |
| 3954373 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 51.0 | 3.94e-01 | 100.0% | 79.0% |
| 5012535 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.53 | 38.0 | 3.19e-01 | 73.3% | 57.9% |
| 3925082 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.53 | 42.0 | 3.43e-01 | 85.9% | 94.7% |
D2
medium
residues 230-269
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m2gA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.73 | 58.0 | 4.56e-01 | 97.5% | 40.9% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.67 | 57.0 | 4.10e-01 | 100.0% | 34.2% |
| 2gy5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 48.0 | 3.78e-01 | 92.5% | 75.8% |
| 3kbgA02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.59 | 42.0 | 3.85e-01 | 75.0% | 56.6% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.58 | 48.0 | 3.53e-01 | 97.5% | 41.0% |
| 4lx3A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.58 | 41.0 | 3.14e-01 | 75.0% | 95.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.15e-01 | 97.5% | 66.7% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.58 | 40.0 | 3.23e-01 | 100.0% | 34.9% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 47.0 | 3.51e-01 | 100.0% | 52.7% |
| 1iamA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.55e-01 | 92.5% | 78.3% |
| 2orzA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 42.0 | 3.07e-01 | 97.5% | 97.4% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.56 | 42.0 | 4.15e-01 | 97.5% | 100.0% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.56 | 42.0 | 3.24e-01 | 97.5% | 45.1% |
| 2m6pA00 | 2.20.28.270 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A | 0.56 | 47.0 | 4.58e-01 | 100.0% | 87.0% |
| 3ud1A02 | 2.60.220.30 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › | 0.56 | 38.0 | 2.60e-01 | 75.0% | 19.6% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 44.0 | 3.99e-01 | 97.5% | 75.0% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.55 | 43.0 | 3.22e-01 | 100.0% | 95.4% |
| 3qdhA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.00e-01 | 95.0% | 88.5% |
| 3r4rA01 | 2.60.40.2580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 41.0 | 3.02e-01 | 97.5% | 91.9% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.30e-01 | 92.5% | 77.3% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 44.0 | 3.80e-01 | 95.0% | 91.2% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.54 | 46.0 | 3.06e-01 | 100.0% | 27.0% |
| 4ofkB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.22e-01 | 92.5% | 79.8% |
| 2bhoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 38.0 | 2.98e-01 | 80.0% | 63.6% |
| 2dm2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.04e-01 | 92.5% | 63.6% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 41.0 | 3.94e-01 | 97.5% | 89.8% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 42.0 | 2.94e-01 | 97.5% | 71.8% |
| 5fm5P00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.06e-01 | 90.0% | 68.4% |
| 4dhiB01 | 3.30.200.60 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Peptidase C65 Otubain, subdomain 1 | 0.51 | 39.0 | 3.06e-01 | 87.5% | 87.1% |
| 6mw4A01 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 2.94e-01 | 97.5% | 77.7% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.50 | 39.0 | 3.18e-01 | 95.0% | 68.4% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.50 | 41.0 | 3.43e-01 | 100.0% | 70.9% |
| 1t9zA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 38.0 | 2.58e-01 | 100.0% | 20.0% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388528 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.84 | 71.0 | 7.14e-01 | 100.0% | 95.0% |
| 5066701 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 56.0 | 5.69e-01 | 97.5% | 100.0% |
| 3412686 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.66 | 52.0 | 3.61e-01 | 92.5% | 54.7% |
| 3604642 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 54.0 | 5.32e-01 | 100.0% | 91.1% |
| 3768922 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.63 | 49.0 | 3.45e-01 | 92.5% | 57.1% |
| 3480842 | 708.1.2.11 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › STEEP1 | 0.63 | 50.0 | 3.96e-01 | 100.0% | 100.0% |
| 3396108 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 47.0 | 3.69e-01 | 92.5% | 80.0% |
| 4993851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 49.0 | 4.81e-01 | 97.5% | 88.9% |
| 4658510 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.59 | 49.0 | 4.92e-01 | 100.0% | 100.0% |
| 3969500 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 50.0 | 3.85e-01 | 100.0% | 49.5% |
| 3484802 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 3.40e-01 | 92.5% | 76.4% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.57 | 49.0 | 3.97e-01 | 100.0% | 57.5% |
| 4499953 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 46.0 | 4.16e-01 | 97.5% | 75.0% |
| 4163851 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 46.0 | 4.14e-01 | 97.5% | 75.0% |
| 3703544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 45.0 | 4.51e-01 | 100.0% | 100.0% |
| 5058845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 48.0 | 2.82e-01 | 100.0% | 15.6% |
| 4658938 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.57 | 47.0 | 3.76e-01 | 100.0% | 50.0% |
| 4123180 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.57 | 47.0 | 3.97e-01 | 100.0% | 60.0% |
| 4451993 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 45.0 | 4.10e-01 | 97.5% | 75.0% |
| 4361060 | 3008.1.1.2 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 | 0.56 | 41.0 | 3.28e-01 | 82.5% | 87.8% |
| 3797921 | 11.1.1.905 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ILCR1 | 0.56 | 42.0 | 3.01e-01 | 92.5% | 77.2% |
| 5004476 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 4.00e-01 | 100.0% | 70.8% |
| 1482194 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.55 | 44.0 | 3.99e-01 | 97.5% | 75.0% |
| 4497244 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.55 | 47.0 | 3.91e-01 | 100.0% | 94.7% |
| 1263519 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.55 | 45.0 | 4.06e-01 | 100.0% | 74.2% |
| 4864730 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 45.0 | 3.35e-01 | 100.0% | 51.3% |
| 223882 | 11.1.4.13 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › P_gingi_FimA | 0.55 | 41.0 | 3.03e-01 | 97.5% | 92.6% |
| 3798428 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 3.56e-01 | 100.0% | 66.3% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 43.0 | 3.83e-01 | 97.5% | 70.8% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 3.78e-01 | 100.0% | 62.7% |
| 4662294 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 43.0 | 4.04e-01 | 97.5% | 81.8% |
| 3800063 | 11.1.1.905 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ILCR1 | 0.54 | 40.0 | 2.81e-01 | 92.5% | 64.0% |
| 3927755 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.54 | 38.0 | 2.53e-01 | 82.5% | 62.8% |
| 4062732 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.54 | 37.0 | 2.51e-01 | 75.0% | 41.1% |
| 3608810 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 38.0 | 3.05e-01 | 77.5% | 91.1% |
| 3402499 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.53 | 42.0 | 3.63e-01 | 95.0% | 85.7% |
| 3203053 | 11.1.5.94 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 | 0.53 | 43.0 | 2.91e-01 | 97.5% | 30.0% |
| 5074749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 3.74e-01 | 100.0% | 65.7% |
| 5016586 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.53 | 36.0 | 2.31e-01 | 75.0% | 15.5% |
| 5064714 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 40.0 | 2.95e-01 | 92.5% | 62.2% |
| 5045730 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 39.0 | 2.89e-01 | 90.0% | 40.0% |
| 3496890 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.52 | 40.0 | 2.36e-01 | 92.5% | 11.6% |
| 4396973 | 3008.1.1.2 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 | 0.52 | 38.0 | 3.05e-01 | 80.0% | 82.2% |
| 3838774 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.52 | 40.0 | 3.18e-01 | 97.5% | 41.0% |
| 4031509 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 3.87e-01 | 97.5% | 76.7% |
| 3625789 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.52 | 40.0 | 3.24e-01 | 100.0% | 56.0% |
| 3964437 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.52 | 39.0 | 3.11e-01 | 100.0% | 43.6% |
| 3294246 | 2484.1.1.15 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 | 0.51 | 42.0 | 2.81e-01 | 100.0% | 35.7% |
| 4962829 | 223.1.1.190 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF7262 | 0.51 | 34.0 | 2.92e-01 | 80.0% | 91.1% |
| 3318333 | 11.1.1.155 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3458 | 0.50 | 41.0 | 3.05e-01 | 100.0% | 56.7% |