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NC_070901.1__YP_010663644.1__PQA02_gp19__00019
Bact-VirNC_070901.1__YP_010663644.1__PQA02_gp19__00019
Identity
- Accession:
- NC_070901 ↗
- Kingdom:
- phage
Quality
97.6
mean pLDDT
Taxonomy
TaxID: 1913081
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f91B04 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.62 | 52.0 | 4.09e-01 | 100.0% | 97.9% |
| 3gzkA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.59 | 44.0 | 2.66e-01 | 83.3% | 48.7% |
| 2aj4B03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.57 | 43.0 | 3.28e-01 | 85.0% | 76.5% |
| 4xrvB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 49.0 | 3.80e-01 | 100.0% | 43.4% |
| 2icwG01 | 1.20.120.390 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 | 0.56 | 41.0 | 3.18e-01 | 80.0% | 37.1% |
| 3etvA01 | 1.10.287.3290 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 40.0 | 3.70e-01 | 90.0% | 86.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2537186 | 4266.1.1.3 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like › NagJ_C | 0.56 | 49.0 | 4.04e-01 | 100.0% | 67.6% |
| 4452096 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.55 | 39.0 | 2.79e-01 | 75.0% | 25.1% |
D2
medium
residues 61-168
Domain cluster:
rep: IMGVR_UViG_2654587756_000002-2654587756-2655684287__D33-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00132.31 best | Hexapep | 28.9 | 9.30e-07 | 33.3% | 80.6% |