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NC_070912.1__YP_010664146.1__PQA64_gp46__00046

Bact-Vir

Identity

Accession:: NC_070912 ↗
Kingdom:: phage

Quality

84.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Tigrvirus› Burkholderia_phage_PhiBP82.2

TaxID: 2914172

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-67

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3rkvA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.70	56.0	4.05e-01	90.2%	47.6%
2y4tA02	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.67	47.0	4.76e-01	74.5%	76.9%
3hibA01	1.10.3380.10	Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain	0.67	48.0	3.75e-01	78.4%	68.6%
1eu8A02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.65	45.0	2.94e-01	72.5%	18.0%
4xrvB01	3.40.50.1980	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain	0.64	53.0	4.02e-01	100.0%	58.1%
6t0bc01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.63	44.0	3.88e-01	74.5%	82.1%
2kw6A00	6.10.140.1300	Special › Helix non-globular › Helix Hairpins ›	0.62	46.0	4.35e-01	84.3%	67.7%
7zcvA02	1.25.40.400	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.61	52.0	3.42e-01	96.1%	45.7%
2zttA00	6.10.140.720	Special › Helix non-globular › Helix Hairpins ›	0.60	48.0	4.36e-01	98.0%	64.4%
3bjdA01	1.10.1240.20	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain	0.58	49.0	4.19e-01	100.0%	92.0%
5m9dA00	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.56	45.0	3.40e-01	96.1%	50.7%
6dcjA02	1.25.40.650	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.55	44.0	3.66e-01	96.1%	51.0%
1ia6A00	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.55	44.0	2.68e-01	98.0%	19.6%
2a2fX02	1.20.58.670	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D	0.54	45.0	3.39e-01	94.1%	63.6%
2pusA04	6.10.140.300	Special › Helix non-globular › Helix Hairpins ›	0.52	42.0	3.49e-01	100.0%	50.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3989332	4967.1.1.11 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › GIIM	0.57	48.0	3.59e-01	96.1%	66.7%
4114117	1056.1.1.1 ↗	a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD	0.57	45.0	3.33e-01	92.2%	95.3%
3623710	3277.2.1.1 ↗	alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C	0.56	46.0	3.79e-01	100.0%	82.9%
4135813	1056.1.1.1 ↗	a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD	0.52	46.0	3.34e-01	100.0%	87.6%