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NC_070927.1__YP_010664921.1__PQB29_gp48__00048

Bact-Vir

NC_070927.1__YP_010664921.1__PQB29_gp48__00048

Identity

Accession:
NC_070927 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paclarkvirus› Streptococcus_phage_SpGS-1

TaxID: 1897555

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98
PDB
Domain cluster: rep: MK448889.1__QBX25524.1__Javan262_0009__00025__D2-98
D2 high residues 102-193
PDB
Domain cluster: rep: NC_055031.1__YP_010082455.1__KMD20_gp20__00020__D105-176
D3 high residues 205-227_421-456_472-492
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.63 49.0 4.66e-01 85.0% 97.9%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.59 45.0 3.82e-01 85.0% 95.0%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 32.0 3.42e-01 83.7% 61.2%
3g7kA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.57 46.0 3.57e-01 91.3% 81.0%
1vbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.31e-01 88.7% 56.7%
1cc1L00 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.56 38.0 2.38e-01 70.0% 86.7%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.56 40.0 3.93e-01 76.2% 80.9%
1dl5A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 44.0 3.25e-01 85.0% 65.2%
5bukB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 37.0 2.38e-01 76.2% 13.4%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 44.0 3.20e-01 88.7% 65.6%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.54 36.0 3.79e-01 78.8% 78.3%
2g5xA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.54 43.0 3.40e-01 88.7% 47.7%
7z0sE02 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.53 40.0 2.71e-01 81.2% 93.1%
3vseA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.53 39.0 4.13e-01 82.5% 100.0%
1llnA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.52 42.0 3.30e-01 88.7% 45.7%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.52 42.0 2.91e-01 88.7% 41.9%
6aikB00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.51 42.0 2.86e-01 91.3% 39.0%
1th0B00 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.51 45.0 3.30e-01 100.0% 51.6%
3da7E00 3.40.20.20 Alpha Beta › 3-Layer(aba) Sandwich › Severin › 0.51 30.0 2.78e-01 93.8% 44.7%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.51 41.0 3.69e-01 88.7% 76.1%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.72e-01 90.0% 40.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033714 1.1.13.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail 0.88 75.0 7.05e-01 90.0% 97.9%
4991143 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 52.0 5.36e-01 85.0% 94.7%
3579037 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 42.0 3.85e-01 88.7% 53.3%
3958367 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 35.0 4.15e-01 71.2% 89.1%
9357 2003.1.5.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT 0.56 46.0 3.31e-01 88.7% 56.7%
9354 2003.1.5.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT 0.56 46.0 3.32e-01 88.7% 62.9%
3574186 7502.1.1.2 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix 0.55 47.0 3.40e-01 93.8% 83.6%
3201338 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 49.0 3.50e-01 100.0% 76.6%
3206278 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 44.0 3.56e-01 90.0% 56.2%
None — 0.54 44.0 3.21e-01 88.7% 60.6%
4030408 2003.1.5.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT 0.54 44.0 3.17e-01 88.7% 65.6%
5045133 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.53 41.0 3.47e-01 85.0% 97.8%
4213613 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.52 42.0 3.81e-01 88.7% 82.7%
5079388 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.51 43.0 3.33e-01 97.5% 95.3%
4062573 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.51 41.0 3.86e-01 90.0% 83.0%
D4 high residues 236-419
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 28.0 4.38e-01 90.8% 98.7%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 27.0 3.29e-01 97.3% 70.7%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.52 20.0 2.73e-01 73.4% 66.3%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 28.0 3.15e-01 97.3% 65.2%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.51 30.0 3.39e-01 87.5% 74.8%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 29.0 3.64e-01 92.9% 94.4%
2g18I00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.51 41.0 3.78e-01 85.9% 89.5%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.49e-01 90.8% 67.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
146266 295.1.1.8 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.66 29.0 4.20e-01 91.3% 89.3%
3414586 11.1.1.824 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chitin_bind_4 0.60 28.0 3.94e-01 77.2% 89.2%
4017051 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.51 31.0 3.49e-01 87.5% 77.9%
3010621 9.13.1.5 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.50 32.0 3.50e-01 81.5% 77.7%
4873102 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.50 34.0 3.91e-01 84.2% 96.2%
D5 high residues 499-587
PDB
Domain cluster: rep: EF583821.1__ABS83757.1__0305phi8-36p199__00100__D311-389
D6 high residues 606-653
PDB
Domain cluster: rep: DQ227763.1__ABB77579.1__X__00013__D5-24_168-201
D7 high residues 840-982
PDB
Domain cluster: rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00157__D2-120
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02018.24 best CBM_4_9 28.7 2.10e-06 79.0% 65.4%
CATH (95)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6tfjA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.82 63.0 7.02e-01 90.2% 99.1%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.82 67.0 7.23e-01 90.2% 100.0%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.80 71.0 6.77e-01 93.0% 89.6%
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.80 66.0 6.86e-01 91.6% 92.4%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.79 68.0 6.69e-01 90.9% 87.5%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.79 68.0 6.64e-01 91.6% 85.9%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.78 67.0 6.63e-01 90.9% 86.4%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.78 67.0 6.37e-01 90.2% 87.7%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 67.0 6.54e-01 90.9% 85.8%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.77 68.0 6.35e-01 93.7% 84.5%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 67.0 6.35e-01 92.3% 83.3%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 66.0 6.44e-01 90.9% 90.4%
5fuiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 59.0 6.32e-01 90.9% 91.9%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 62.0 6.42e-01 92.3% 89.6%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.76 65.0 6.48e-01 90.9% 88.3%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 64.0 6.45e-01 89.5% 92.3%
2w3jA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 62.0 6.31e-01 98.6% 89.8%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 65.0 5.73e-01 91.6% 83.3%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 65.0 6.19e-01 91.6% 80.7%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.74 59.0 6.11e-01 91.6% 88.8%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 64.0 6.13e-01 92.3% 88.9%
4c91A04 2.60.120.1620 Mainly Beta › Sandwich › Jelly Rolls › 0.73 68.0 6.13e-01 99.3% 84.7%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 63.0 5.88e-01 91.6% 86.8%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 58.0 6.11e-01 89.5% 93.7%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 62.0 5.77e-01 91.6% 86.0%
5f7uA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 57.0 6.00e-01 90.9% 92.9%
3c7fA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 61.0 6.16e-01 88.8% 100.0%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 58.0 6.03e-01 92.3% 92.3%
4p02B03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 53.0 5.35e-01 76.2% 89.5%
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 61.0 5.98e-01 91.6% 87.1%
7bysA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 54.0 5.83e-01 88.8% 93.4%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 61.0 6.09e-01 90.9% 93.1%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.71 53.0 5.51e-01 76.9% 94.7%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.71 53.0 5.36e-01 76.9% 94.3%
2x29A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.71 52.0 5.04e-01 75.5% 84.6%
7ehgC01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 56.0 5.92e-01 90.2% 93.8%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.70 52.0 5.48e-01 76.9% 94.7%
2wz8A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 57.0 5.87e-01 90.9% 91.1%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 5.19e-01 92.3% 88.9%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 51.0 4.70e-01 76.9% 84.9%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.69 51.0 5.37e-01 76.9% 93.9%
1wckA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.68 55.0 5.67e-01 83.9% 91.2%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.68 51.0 5.26e-01 76.9% 94.7%
4c1wA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 52.0 4.72e-01 79.7% 96.8%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.68 54.0 5.37e-01 92.3% 81.5%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 42.0 4.86e-01 91.6% 87.1%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 57.0 4.72e-01 90.9% 87.4%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.68 50.0 5.14e-01 75.5% 95.5%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.67 48.0 5.50e-01 89.5% 100.0%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 53.0 5.54e-01 90.9% 90.9%
1o59A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 55.0 5.58e-01 90.2% 90.6%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.65 45.0 5.23e-01 84.6% 99.0%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.65 55.0 5.09e-01 90.9% 95.6%
4ht1T00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.65 48.0 4.99e-01 76.2% 93.9%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.65 37.0 4.59e-01 73.4% 92.9%
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.65 44.0 5.07e-01 83.2% 99.0%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.65 48.0 4.74e-01 76.2% 99.3%
2vmhA00 2.60.120.1060 Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain 0.65 54.0 5.39e-01 89.5% 92.5%
7wqxA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.63 46.0 5.16e-01 90.2% 100.0%
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 51.0 5.25e-01 90.2% 90.4%
2vovA00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.63 54.0 4.22e-01 90.9% 93.4%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 5.09e-01 83.9% 94.0%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.63 45.0 4.86e-01 83.9% 89.7%
3h8uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 41.0 4.46e-01 94.4% 78.7%
2orzA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 51.0 4.96e-01 90.9% 86.2%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.61 52.0 4.70e-01 90.9% 68.8%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 40.0 4.73e-01 81.8% 97.0%
2q7nA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 37.0 4.31e-01 97.2% 87.8%
2xbzA00 2.60.40.2380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 5.19e-01 100.0% 97.0%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 41.0 4.42e-01 98.6% 85.3%
3gldA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.59 40.0 4.11e-01 79.0% 71.3%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.59 43.0 4.68e-01 76.2% 91.6%
2pfwA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 39.0 4.27e-01 99.3% 83.8%
2vm9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 53.0 5.17e-01 97.9% 90.3%
3m5gA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.59 49.0 4.33e-01 90.9% 61.5%
3vmnA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 4.66e-01 81.8% 94.6%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.58 41.0 4.51e-01 86.0% 91.9%
6qe7A01 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.57 49.0 5.06e-01 99.3% 97.1%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 42.0 4.30e-01 95.1% 77.6%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 4.74e-01 86.0% 91.1%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 4.34e-01 85.3% 95.2%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 34.0 3.93e-01 97.2% 84.2%
5a3lA00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 4.34e-01 98.6% 85.6%
6qdiA02 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.55 47.0 4.86e-01 99.3% 97.8%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.54 43.0 4.37e-01 96.5% 85.8%
4cp2A00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.23e-01 99.3% 86.3%
1s2kA00 2.60.120.700 Mainly Beta › Sandwich › Jelly Rolls › Peptidase G1 0.54 47.0 4.23e-01 95.1% 97.0%
5cadA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 41.0 3.81e-01 99.3% 62.4%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 4.32e-01 99.3% 97.0%
4couA00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.11e-01 99.3% 84.1%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 4.28e-01 83.9% 98.2%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 4.19e-01 99.3% 80.5%
4nhxA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 46.0 3.99e-01 98.6% 68.5%
3kt7A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.51 45.0 3.85e-01 98.6% 73.2%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.50 38.0 3.96e-01 100.0% 87.2%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4663349 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.85 67.0 7.05e-01 89.5% 89.2%
4960572 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.83 72.0 6.86e-01 91.6% 83.0%
3180910 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.82 69.0 7.03e-01 90.2% 89.3%
3424937 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.82 72.0 6.66e-01 92.3% 85.7%
3183427 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.82 69.0 6.94e-01 90.2% 86.9%
3916271 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.81 72.0 6.54e-01 93.7% 80.5%
5064593 10.1.2.181 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.81 69.0 7.26e-01 89.5% 100.0%
3343220 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.80 70.0 6.52e-01 92.3% 83.4%
3729155 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.80 70.0 6.60e-01 91.6% 89.7%
4960568 10.1.2.181 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.80 68.0 6.64e-01 91.6% 82.6%
3945567 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.80 70.0 6.87e-01 92.3% 87.3%
3538228 10.32.1.216 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.79 69.0 6.47e-01 91.6% 85.9%
3435000 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.79 69.0 6.49e-01 92.3% 81.2%
3841027 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.78 70.0 6.78e-01 93.7% 87.1%
337395 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.78 67.0 6.63e-01 90.9% 86.4%
4092778 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.78 60.0 6.33e-01 92.3% 87.7%
3930018 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.78 68.0 6.58e-01 90.9% 89.0%
4468809 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.78 69.0 6.48e-01 93.7% 87.1%
5058689 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 52.0 6.13e-01 90.9% 97.0%
3243572 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.78 67.0 6.69e-01 97.2% 89.0%
2723157 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.77 59.0 5.99e-01 79.7% 80.7%
170073 10.32.1.12 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.77 63.0 6.40e-01 97.9% 88.4%
4304353 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.77 66.0 6.48e-01 91.6% 86.5%
3804238 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.77 60.0 5.99e-01 81.1% 89.0%
3663362 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.76 59.0 5.72e-01 81.1% 83.1%
3663870 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.76 66.0 6.14e-01 91.6% 75.4%
4218569 10.32.1.301 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › InhA-like_MAM 0.76 66.0 6.26e-01 93.7% 85.9%
4124871 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.75 59.0 6.31e-01 89.5% 95.2%
5040308 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 65.0 6.21e-01 92.3% 87.3%
4048590 10.32.1.53 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like 0.75 65.0 6.01e-01 91.6% 85.7%
4177785 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.74 56.0 6.27e-01 79.0% 100.0%
5027268 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 66.0 6.45e-01 95.8% 93.5%
3661818 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 54.0 6.10e-01 90.2% 98.2%
3821517 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.74 60.0 5.84e-01 91.6% 78.7%
3584610 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.74 64.0 6.28e-01 90.9% 90.7%
3625061 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.74 63.0 5.72e-01 90.9% 71.6%
3258529 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 49.0 5.74e-01 72.7% 97.0%
4615128 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 63.0 6.26e-01 91.6% 88.0%
5077191 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 49.0 5.65e-01 83.9% 96.0%
3533957 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.73 63.0 6.29e-01 90.9% 89.7%
3809848 10.32.1.199 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF642 0.73 63.0 5.89e-01 91.6% 75.9%
3351377 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.73 58.0 5.67e-01 90.9% 77.4%
4945026 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 50.0 5.66e-01 76.2% 91.8%
3243382 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.73 62.0 5.74e-01 90.9% 80.0%
5040751 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 51.0 5.68e-01 83.2% 93.6%
3257863 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 62.0 6.25e-01 91.6% 92.1%
3923896 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 62.0 5.66e-01 90.9% 74.1%
4950754 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 48.0 5.58e-01 82.5% 93.3%
3018675 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 56.0 5.84e-01 88.8% 89.3%
3503839 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 63.0 6.20e-01 93.0% 88.3%
5038687 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 47.0 5.44e-01 73.4% 94.0%
5038652 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 48.0 5.45e-01 74.1% 92.4%
4874426 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.71 53.0 5.51e-01 76.9% 93.9%
3925162 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 50.0 5.59e-01 74.1% 93.6%
3659663 10.32.1.37 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.70 58.0 5.52e-01 91.6% 74.1%
139852 10.32.1.12 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.70 57.0 5.87e-01 90.9% 91.1%
3742116 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.70 51.0 5.67e-01 76.2% 94.8%
3707942 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 49.0 5.43e-01 91.6% 90.4%
3535343 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.69 51.0 5.10e-01 76.9% 88.0%
3243463 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 57.0 5.46e-01 90.9% 75.8%
3908103 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.69 51.0 5.39e-01 76.9% 94.6%
3600415 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 58.0 5.53e-01 90.9% 90.6%
4934399 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 54.0 5.89e-01 90.9% 99.2%
3526370 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.68 50.0 5.41e-01 76.2% 90.0%
3821279 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.68 58.0 5.42e-01 90.9% 76.0%
3241410 10.32.1.218 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.68 47.0 5.29e-01 74.1% 91.8%
4950864 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 48.0 5.44e-01 90.9% 94.5%
4944602 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 52.0 5.15e-01 84.6% 76.0%
3342352 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.68 48.0 5.39e-01 77.6% 95.5%
1158350 10.32.1.165 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM13-like 0.68 41.0 4.93e-01 90.2% 92.5%
3241031 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.67 49.0 5.38e-01 76.2% 92.2%
3815478 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.67 58.0 5.23e-01 91.6% 70.5%
3243381 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 61.0 5.95e-01 97.9% 88.6%
3522617 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.67 50.0 4.97e-01 77.6% 96.0%
3300834 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.67 49.0 5.32e-01 78.3% 93.0%
3303761 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.66 56.0 5.05e-01 90.9% 69.7%
3381013 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.66 49.0 4.75e-01 91.6% 68.1%
3348556 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.66 56.0 5.14e-01 90.9% 71.4%
3883934 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.66 53.0 4.99e-01 84.6% 73.5%
3221888 10.32.1.218 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.66 50.0 5.39e-01 83.2% 92.7%
3894175 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.65 52.0 5.13e-01 83.9% 86.0%
4942975 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 49.0 5.35e-01 78.3% 97.4%
3599776 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 47.0 5.13e-01 75.5% 94.1%
3913258 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.65 51.0 5.19e-01 83.2% 92.1%
3316897 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.64 55.0 5.10e-01 91.6% 75.6%
4466626 10.32.1.244 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.64 45.0 4.97e-01 84.6% 92.7%
3868830 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.64 51.0 4.97e-01 84.6% 84.4%
5039888 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.63 45.0 4.81e-01 74.1% 85.6%
3624575 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.63 50.0 5.44e-01 90.9% 100.0%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 46.0 4.85e-01 83.9% 83.8%
3889465 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 48.0 5.29e-01 90.2% 100.0%
3591997 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 45.0 4.73e-01 83.9% 82.3%
4665454 10.32.1.244 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.62 47.0 5.11e-01 83.2% 95.8%
5050767 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 46.0 5.09e-01 76.2% 99.1%
3716837 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 47.0 4.91e-01 79.0% 93.1%
3701147 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 55.0 5.07e-01 98.6% 93.5%
4940882 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 46.0 4.86e-01 97.2% 90.7%
D8 medium residues 684-744
PDB
Domain cluster: rep: DQ227763.1__ABB77579.1__X__00013__D5-24_168-201