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NC_070936.1__YP_010665612.1__PQB72_gp151__00151
Bact-VirNC_070936.1__YP_010665612.1__PQB72_gp151__00151
Identity
- Accession:
- NC_070936 ↗
- Kingdom:
- phage
Quality
78.5
mean pLDDT
Taxonomy
TaxID: 2664939
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-53
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.89 | 64.0 | 5.36e-01 | 76.6% | 49.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 62.0 | 5.31e-01 | 76.6% | 52.1% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.84 | 60.0 | 4.13e-01 | 76.6% | 24.8% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.80 | 60.0 | 5.99e-01 | 80.9% | 79.2% |
| 5isuA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.79 | 57.0 | 3.66e-01 | 76.6% | 17.1% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 57.0 | 4.57e-01 | 76.6% | 41.8% |
| 2a26B01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.79 | 55.0 | 5.66e-01 | 74.5% | 79.5% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.78 | 54.0 | 5.29e-01 | 72.3% | 96.1% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 56.0 | 3.34e-01 | 80.9% | 13.1% |
| 3no6A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.74 | 67.0 | 4.16e-01 | 100.0% | 66.8% |
| 4ga0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 47.0 | 3.35e-01 | 76.6% | 25.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3372843 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.89 | 62.0 | 6.91e-01 | 72.3% | 100.0% |
| 4364457 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.89 | 64.0 | 6.57e-01 | 76.6% | 86.7% |
| 4040184 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.89 | 64.0 | 6.29e-01 | 76.6% | 78.0% |
| 3638713 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.88 | 64.0 | 3.56e-01 | 76.6% | 7.6% |
| 3932069 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.88 | 64.0 | 5.37e-01 | 76.6% | 50.7% |
| 3423915 | 6132.1.1.10 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › R3H-assoc | 0.87 | 61.0 | 5.83e-01 | 74.5% | 63.6% |
| 5005635 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 74.0 | 7.00e-01 | 97.9% | 81.8% |
| 3345923 | 4973.1.1.0 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core | 0.82 | 58.0 | 6.34e-01 | 74.5% | 100.0% |
| 3710888 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.81 | 58.0 | 4.20e-01 | 76.6% | 28.5% |
| 3612126 | 548.1.1.1 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP | 0.80 | 54.0 | 5.48e-01 | 70.2% | 73.3% |
| 5004859 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.79 | 56.0 | 5.54e-01 | 76.6% | 76.0% |