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NC_070937.1__YP_010665821.1__PQB73_gp203__00103
Bact-VirNC_070937.1__YP_010665821.1__PQB73_gp203__00103
Identity
- Accession:
- NC_070937 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Nanhuvirus›
Cronobacter_phage_LPCS28
TaxID: 2924885
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-69
Domain cluster:
rep: MT161459.1__QIW86959.1__AHP1_1281__00128__D11-81
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.61 | 39.0 | 4.30e-01 | 91.2% | 84.9% |
| 3iylW05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.74e-01 | 100.0% | 54.2% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 36.0 | 3.67e-01 | 100.0% | 65.7% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 37.0 | 3.90e-01 | 98.5% | 77.6% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.55e-01 | 100.0% | 58.7% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 2.87e-01 | 100.0% | 37.4% |
| 1mppA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.54 | 47.0 | 3.53e-01 | 100.0% | 99.4% |
| 1wqwA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 45.0 | 3.38e-01 | 100.0% | 38.5% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.53 | 38.0 | 3.22e-01 | 77.9% | 83.7% |
| 3lxuX01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.53 | 44.0 | 2.94e-01 | 100.0% | 79.9% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 3.54e-01 | 98.5% | 73.8% |
| 2v9vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 34.0 | 3.53e-01 | 98.5% | 75.0% |
| 2c43A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 43.0 | 3.51e-01 | 100.0% | 72.7% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.07e-01 | 100.0% | 45.5% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 2.88e-01 | 100.0% | 36.2% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 34.0 | 3.44e-01 | 100.0% | 71.2% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.66e-01 | 85.3% | 81.0% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 34.0 | 3.27e-01 | 100.0% | 57.6% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290854 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.73 | 54.0 | 3.60e-01 | 77.9% | 21.6% |
| 3184166 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.66 | 45.0 | 5.14e-01 | 100.0% | 96.0% |
| 4585752 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.64 | 43.0 | 4.27e-01 | 100.0% | 67.1% |
| 3341667 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.64 | 43.0 | 4.00e-01 | 100.0% | 56.5% |
| 3481968 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.63 | 43.0 | 3.59e-01 | 100.0% | 41.7% |
| 3359252 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.62 | 42.0 | 3.30e-01 | 100.0% | 34.8% |
| 3255880 | 101.1.2.511 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI, PF26569 | 0.62 | 41.0 | 3.52e-01 | 100.0% | 42.7% |
| 3932561 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.62 | 40.0 | 4.55e-01 | 98.5% | 92.0% |
| 4012125 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 41.0 | 4.23e-01 | 100.0% | 72.3% |
| 3706057 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 41.0 | 3.20e-01 | 100.0% | 32.4% |
| 3739278 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 41.0 | 4.35e-01 | 100.0% | 78.3% |
| 3185112 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 42.0 | 4.06e-01 | 100.0% | 64.0% |
| 3513804 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 40.0 | 4.41e-01 | 98.5% | 83.6% |
| 3243907 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 41.0 | 4.58e-01 | 100.0% | 94.0% |
| 3380740 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 41.0 | 4.52e-01 | 100.0% | 87.3% |
| 4026548 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 40.0 | 3.57e-01 | 100.0% | 47.0% |
| 3557944 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 41.0 | 3.99e-01 | 100.0% | 64.0% |
| 3503496 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 41.0 | 4.32e-01 | 100.0% | 80.0% |
| 3739047 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 41.0 | 3.99e-01 | 100.0% | 64.0% |
| 3513904 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 40.0 | 3.85e-01 | 100.0% | 58.7% |
| 4975590 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 38.0 | 3.76e-01 | 100.0% | 60.0% |
| 3812195 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 40.0 | 3.49e-01 | 100.0% | 45.7% |
| 5049150 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 39.0 | 4.04e-01 | 100.0% | 72.3% |
| 3296862 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 40.0 | 3.88e-01 | 100.0% | 62.7% |
| 3608461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 39.0 | 4.02e-01 | 100.0% | 72.3% |
| 4003350 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 39.0 | 3.94e-01 | 100.0% | 67.1% |
| 3715642 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 39.0 | 3.83e-01 | 100.0% | 62.7% |
| 3795794 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 39.0 | 3.92e-01 | 100.0% | 67.1% |
| 3685184 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 40.0 | 3.38e-01 | 100.0% | 42.6% |
| 3704997 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 38.0 | 4.23e-01 | 98.5% | 92.0% |
| 4998549 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 38.0 | 3.69e-01 | 100.0% | 58.7% |
| 3262224 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 38.0 | 3.84e-01 | 100.0% | 67.1% |
| 5078487 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 38.0 | 3.68e-01 | 100.0% | 58.7% |
| 3206547 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 39.0 | 3.56e-01 | 100.0% | 52.2% |
| 4998376 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 36.0 | 3.77e-01 | 98.5% | 68.8% |
| 3363790 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.57 | 38.0 | 3.82e-01 | 100.0% | 67.1% |
| 3336650 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 38.0 | 2.34e-01 | 100.0% | 10.6% |
| 5067854 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.57 | 39.0 | 3.21e-01 | 100.0% | 37.7% |
| 4998547 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 38.0 | 3.93e-01 | 100.0% | 72.3% |
| 3605455 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.57 | 38.0 | 4.25e-01 | 100.0% | 94.0% |
| 3796387 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.55 | 37.0 | 3.16e-01 | 100.0% | 41.7% |
| 5053252 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.54 | 36.0 | 3.21e-01 | 100.0% | 42.7% |
| 5056155 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.54 | 36.0 | 3.25e-01 | 100.0% | 47.0% |
| 5034976 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 35.0 | 3.37e-01 | 100.0% | 54.1% |
| 3610270 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 38.0 | 2.39e-01 | 76.5% | 17.5% |
| 3698981 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.54 | 35.0 | 3.46e-01 | 98.5% | 61.3% |
| 4025539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.53 | 36.0 | 3.55e-01 | 100.0% | 64.0% |
| 4944342 | 101.1.2.899 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 | 0.53 | 35.0 | 3.09e-01 | 98.5% | 43.8% |
| 5045825 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.48e-01 | 100.0% | 58.8% |
| 5068738 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.83e-01 | 75.0% | 95.4% |
| 3218434 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.53 | 35.0 | 3.35e-01 | 100.0% | 57.5% |
| 5012661 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.52 | 35.0 | 3.43e-01 | 100.0% | 62.7% |
| 3417042 | 101.1.2.493 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26557 | 0.52 | 36.0 | 3.50e-01 | 100.0% | 63.7% |
| 5079104 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 43.0 | 2.82e-01 | 95.6% | 46.5% |
| 5028861 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 34.0 | 3.68e-01 | 100.0% | 85.5% |
| 3609864 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.52 | 34.0 | 2.46e-01 | 100.0% | 20.9% |
| 3986771 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.52 | 46.0 | 3.73e-01 | 100.0% | 53.1% |
| 3365377 | 304.48.1.55 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Cu-oxidase_2 | 0.52 | 36.0 | 2.60e-01 | 75.0% | 31.4% |
| 3491617 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.51 | 36.0 | 3.11e-01 | 73.5% | 61.0% |
| 4977438 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 35.0 | 3.33e-01 | 100.0% | 58.8% |
| 5045993 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 3.66e-01 | 72.1% | 95.4% |
| 3483048 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.50 | 33.0 | 3.25e-01 | 100.0% | 61.3% |