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NC_070937.1__YP_010665950.1__PQB73_gp074__00232

Bact-Vir

NC_070937.1__YP_010665950.1__PQB73_gp074__00232

Identity

Accession:
NC_070937 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Nanhuvirus› Cronobacter_phage_LPCS28

TaxID: 2924885

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-172
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07880.17 best T4_gp9_10_N 39.9 6.50e-10 99.0% 56.6%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA02 2.60.120.640 Mainly Beta › Sandwich › Jelly Rolls › gp9 0.94 86.0 8.56e-01 100.0% 92.2%
2z4tA01 2.60.40.3010 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 34.0 3.51e-01 92.1% 68.5%
1hxdA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 44.0 3.53e-01 90.1% 66.0%
2a74A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.51 36.0 3.63e-01 92.1% 72.4%
2wnkA02 2.60.40.1320 Mainly Beta › Sandwich › Immunoglobulin-like › SRS domain 0.51 39.0 3.85e-01 81.2% 80.2%
2wnkA01 2.60.40.1320 Mainly Beta › Sandwich › Immunoglobulin-like › SRS domain 0.50 38.0 3.65e-01 80.2% 76.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
184462 520.1.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 0.94 86.0 6.98e-01 100.0% 56.5%
1070458 520.1.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 0.88 84.0 6.98e-01 100.0% 62.5%
4942044 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 51.0 4.07e-01 81.2% 85.2%
4926790 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.54 35.0 3.97e-01 70.3% 88.0%
3825581 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.53 43.0 4.26e-01 87.1% 96.3%
3373520 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.53 43.0 4.05e-01 87.1% 96.7%
3377679 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.52 42.0 4.13e-01 85.1% 98.1%
3345450 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.51 43.0 4.03e-01 89.1% 82.5%
3299017 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.51 41.0 4.06e-01 87.1% 94.5%
3740667 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.51 33.0 3.42e-01 71.3% 70.5%
3358389 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.50 42.0 4.02e-01 89.1% 86.8%
3603774 239.5.1.1 ↗ beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae 0.50 34.0 3.57e-01 93.1% 77.8%
D2 high residues 182-285
PDB
Domain cluster: rep: ON399185.1__URG18043.1__T765_00205__00199__D661-785
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.89 85.0 8.19e-01 100.0% 93.9%
2h6oA01 2.60.40.2800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 63.0 5.61e-01 100.0% 84.6%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.69 52.0 4.66e-01 79.8% 100.0%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.69 56.0 4.24e-01 86.5% 88.7%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.67 55.0 5.17e-01 100.0% 72.3%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.65 50.0 3.93e-01 82.7% 50.4%
2h6oA02 2.60.40.2810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 57.0 4.99e-01 98.1% 81.9%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.64 49.0 4.37e-01 82.7% 97.4%
2c9jA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.64 47.0 3.72e-01 76.9% 48.8%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.64 47.0 3.50e-01 76.9% 45.2%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.63 55.0 4.01e-01 95.2% 95.3%
7altB01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 46.0 4.02e-01 77.9% 55.1%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.61 49.0 3.99e-01 86.5% 60.5%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 47.0 4.35e-01 83.7% 97.1%
1cjyA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.60 44.0 4.17e-01 76.9% 65.9%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.60 43.0 4.23e-01 75.0% 79.6%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.59 44.0 4.35e-01 77.9% 83.6%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.59 43.0 3.99e-01 76.0% 69.2%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.59 43.0 3.04e-01 75.0% 28.4%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.59 43.0 4.32e-01 77.9% 85.2%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.59 47.0 3.92e-01 86.5% 93.4%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.58 46.0 3.91e-01 86.5% 96.1%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.58 43.0 4.21e-01 77.9% 84.1%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.58 47.0 3.92e-01 86.5% 93.2%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.58 51.0 4.82e-01 100.0% 79.4%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 42.0 3.83e-01 76.9% 64.8%
1xt5A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 51.0 4.73e-01 100.0% 80.7%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 3.96e-01 100.0% 71.5%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.57 47.0 4.32e-01 86.5% 72.5%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.57 46.0 4.19e-01 90.4% 97.4%
3hrdB01 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.57 44.0 3.78e-01 81.7% 86.0%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.57 47.0 4.01e-01 88.5% 74.2%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.57 48.0 4.19e-01 95.2% 95.1%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.57 48.0 4.64e-01 99.0% 83.8%
1gqgC02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 41.0 3.36e-01 99.0% 42.9%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.55 41.0 3.05e-01 80.8% 56.0%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 4.10e-01 100.0% 80.6%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.55 44.0 4.08e-01 86.5% 73.7%
3w57A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 40.0 4.01e-01 79.8% 98.2%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 3.97e-01 100.0% 96.5%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 49.0 4.36e-01 100.0% 93.2%
1ju3A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 47.0 3.82e-01 100.0% 97.2%
1t3qB04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.54 40.0 3.36e-01 79.8% 73.2%
2a74D01 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.54 39.0 3.68e-01 99.0% 61.7%
3nsjA02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 43.0 4.07e-01 100.0% 70.3%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.54 48.0 4.34e-01 98.1% 96.4%
3sybA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 45.0 3.10e-01 94.2% 98.3%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 42.0 4.17e-01 100.0% 80.7%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 45.0 4.28e-01 97.1% 77.0%
2i1sA00 3.10.290.30 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like 0.53 39.0 3.33e-01 77.9% 62.9%
1ffvB04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.53 40.0 3.26e-01 79.8% 84.3%
6iomB01 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.53 28.0 3.16e-01 76.9% 67.5%
5e4sA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.98e-01 99.0% 84.0%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 4.22e-01 100.0% 93.2%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.48e-01 100.0% 80.1%
2wjsA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.84e-01 99.0% 89.6%
6tr4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 4.22e-01 98.1% 99.2%
4dloA03 2.60.220.50 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › 0.52 37.0 3.19e-01 100.0% 45.6%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.51 46.0 4.23e-01 100.0% 80.7%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.51 46.0 4.48e-01 100.0% 100.0%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.97e-01 100.0% 91.4%
2kc5A01 3.30.1460.40 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › [NiFe]-hydrogenase assembly chaperone, HybE 0.51 35.0 3.29e-01 73.1% 79.4%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.50 43.0 4.38e-01 98.1% 96.1%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
441034 3386.1.1.4 ↗ beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C 0.89 85.0 8.01e-01 100.0% 89.2%
2581320 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.79 74.0 6.89e-01 100.0% 93.6%
2512673 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.77 66.0 6.21e-01 100.0% 76.2%
3609844 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.76 69.0 6.05e-01 99.0% 90.0%
3251054 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 64.0 5.60e-01 100.0% 74.8%
1548777 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.69 56.0 4.24e-01 86.5% 88.7%
3373176 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.67 50.0 4.61e-01 80.8% 100.0%
3650579 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.66 50.0 4.54e-01 79.8% 99.3%
2532980 219.1.1.53 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.65 47.0 3.49e-01 79.8% 30.7%
3220160 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 49.0 4.44e-01 79.8% 100.0%
3974567 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.65 51.0 3.76e-01 82.7% 95.1%
5036836 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 52.0 4.00e-01 86.5% 88.7%
3930166 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.64 47.0 4.35e-01 77.9% 65.2%
3964096 5084.1.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.63 49.0 4.15e-01 82.7% 86.9%
4955095 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 43.0 4.66e-01 97.1% 85.9%
3446425 11.1.1.558 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6598 0.62 44.0 4.19e-01 77.9% 62.5%
3438038 11.2.1.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.62 45.0 4.20e-01 76.9% 70.4%
4248693 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 55.0 4.58e-01 99.0% 95.7%
4191031 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.62 54.0 3.86e-01 95.2% 94.8%
4490044 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 53.0 3.88e-01 93.3% 97.2%
4339003 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 53.0 3.85e-01 95.2% 97.3%
4220410 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 54.0 5.54e-01 100.0% 98.0%
5014023 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.62 50.0 4.12e-01 86.5% 90.2%
4498349 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.62 51.0 4.20e-01 87.5% 87.2%
4638995 71.1.1.15 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 0.61 50.0 4.01e-01 86.5% 84.0%
4075543 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 49.0 3.52e-01 86.5% 99.0%
5015520 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.60 49.0 3.86e-01 86.5% 91.0%
1123809 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 43.0 4.31e-01 77.9% 72.5%
5033433 244.2.1.1 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.60 44.0 4.17e-01 78.8% 75.8%
4929792 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 51.0 5.19e-01 99.0% 95.0%
5018904 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.59 49.0 3.93e-01 87.5% 85.6%
3908612 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 42.0 3.89e-01 76.9% 57.5%
3609787 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.59 53.0 4.84e-01 97.1% 77.0%
3963175 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.59 47.0 3.90e-01 86.5% 86.5%
3485290 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 52.0 4.06e-01 100.0% 56.2%
3618320 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 50.0 5.00e-01 100.0% 88.9%
5077191 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 50.0 5.07e-01 100.0% 96.0%
5060870 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 53.0 5.32e-01 100.0% 97.1%
5032655 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.15e-01 99.0% 76.5%
5082343 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 43.0 3.33e-01 78.8% 74.8%
3601598 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 43.0 4.12e-01 79.8% 78.3%
4304754 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 47.0 3.50e-01 93.3% 95.4%
5011055 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 50.0 4.20e-01 100.0% 97.3%
4992294 10.1.1.117 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.57 49.0 3.83e-01 100.0% 73.2%
3934459 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 4.47e-01 100.0% 86.0%
4951746 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 51.0 5.11e-01 100.0% 98.1%
4561898 11.1.1.535 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_M26_N 0.56 41.0 3.72e-01 100.0% 56.2%
3980456 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.56 41.0 2.65e-01 76.0% 20.9%
3906392 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 43.0 4.02e-01 100.0% 66.2%
4465334 4252.1.1.7 ↗ beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.55 45.0 3.59e-01 91.3% 100.0%
3849839 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.55 41.0 4.21e-01 79.8% 100.0%
4957722 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.55 43.0 3.90e-01 82.7% 100.0%
4382844 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 49.0 4.59e-01 100.0% 86.2%
5009919 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 47.0 3.87e-01 100.0% 69.4%
4136508 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.55 45.0 3.28e-01 93.3% 97.3%
337395 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.54 49.0 4.36e-01 100.0% 93.2%
3225599 10.32.1.218 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.54 48.0 3.82e-01 100.0% 47.7%
3814061 5.1.3.265 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_FKB95 0.53 38.0 2.81e-01 76.9% 98.7%
4966157 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 44.0 3.67e-01 92.3% 90.0%
3328172 10.1.1.12 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C 0.53 48.0 3.50e-01 100.0% 71.1%
5064686 4178.1.1.1 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.53 41.0 3.92e-01 85.6% 89.1%
4367390 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.53 43.0 2.89e-01 91.3% 33.8%
3286199 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 42.0 3.88e-01 90.4% 98.6%
4022742 3385.1.1.0 ↗ beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 0.52 40.0 3.63e-01 84.6% 87.2%
3946102 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.52 40.0 2.66e-01 89.4% 20.0%
5033918 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.52 45.0 3.86e-01 100.0% 97.8%
3924083 2484.1.1.204 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.52 35.0 3.07e-01 70.2% 64.7%
4254174 4099.1.1.22 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P 0.51 43.0 3.84e-01 89.4% 72.4%
3945603 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.51 42.0 2.82e-01 92.3% 35.6%
3968806 5084.5.1.68 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 0.51 40.0 3.29e-01 86.5% 90.4%
4008074 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.51 42.0 2.80e-01 92.3% 32.7%
4961700 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 36.0 3.74e-01 100.0% 84.2%
D3 medium residues 1-60
PDB
Domain cluster: rep: IMGVR_UViG_3300026212_000163-3300026212-Ga0208409_10047674__D1-54
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07880.17 best T4_gp9_10_N 40.4 4.70e-10 90.0% 23.4%