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NC_070938.1__YP_010666007.1__PQB74_gp19__00019

Bact-Vir

NC_070938.1__YP_010666007.1__PQB74_gp19__00019

Identity

Accession:
NC_070938 ↗
Kingdom:
phage

Quality

73.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mudcatvirus› Arthrobacter_phage_Arcadia

TaxID: 2024274

Cluster

View cluster (77 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-230
PDB
Domain cluster: rep: MN184886.1__QEQ94782.1__pEpSNUABM08_35__00035__D2-217
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d44A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.81 76.0 6.42e-01 100.0% 94.7%
4be3A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.79 66.0 5.62e-01 87.6% 100.0%
1ms5B02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 6.59e-01 98.5% 82.1%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 63.0 6.71e-01 89.1% 98.9%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 64.0 6.02e-01 90.0% 85.8%
4ccdA03 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.74 64.0 6.45e-01 89.6% 97.0%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 66.0 6.64e-01 98.0% 98.0%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 6.40e-01 100.0% 97.0%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 61.0 5.89e-01 88.6% 100.0%
1a8dA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 6.08e-01 98.0% 90.7%
3w9aA00 2.60.120.1160 Mainly Beta › Sandwich › Jelly Rolls › 0.71 67.0 6.30e-01 100.0% 98.3%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 6.21e-01 100.0% 94.8%
3hbkA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.70 60.0 5.72e-01 90.0% 93.1%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 5.83e-01 90.5% 98.6%
1wcuA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.69 49.0 5.60e-01 97.5% 96.6%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 57.0 5.84e-01 88.6% 99.0%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 57.0 5.89e-01 88.6% 98.4%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.67 43.0 5.16e-01 76.6% 94.2%
1gv9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 58.0 5.60e-01 90.5% 97.3%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 53.0 5.11e-01 82.6% 90.4%
3tojA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.66 51.0 5.50e-01 79.6% 98.3%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.66 44.0 5.09e-01 92.5% 91.8%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.18e-01 88.1% 88.8%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 5.20e-01 88.1% 87.4%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.64 48.0 5.24e-01 93.5% 92.8%
1gnyA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 44.0 4.94e-01 90.5% 96.7%
2e63A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 45.0 4.91e-01 77.6% 99.4%
2bw8A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.60 49.0 4.71e-01 85.6% 99.6%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 38.0 4.55e-01 94.0% 98.5%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 44.0 4.87e-01 93.0% 98.1%
4kg0A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.57 42.0 4.75e-01 81.1% 100.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.54 26.0 3.50e-01 81.1% 88.2%
3nngA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 37.0 4.20e-01 91.0% 94.8%
3kl0D01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 28.0 3.62e-01 84.1% 100.0%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264222 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.77 57.0 5.31e-01 76.1% 74.8%
3714006 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.76 72.0 6.71e-01 99.5% 84.8%
169882 10.1.1.32 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser 0.75 66.0 6.69e-01 90.5% 97.4%
3580761 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.75 55.0 5.01e-01 75.1% 89.4%
4958268 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.74 68.0 6.71e-01 97.0% 96.7%
3712659 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.73 68.0 6.76e-01 98.0% 95.2%
2984295 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.73 67.0 6.68e-01 97.5% 96.6%
1570612 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.73 67.0 6.66e-01 97.5% 96.6%
3707066 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.73 68.0 6.70e-01 99.5% 95.3%
4633731 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.72 66.0 6.42e-01 97.5% 96.8%
5042581 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.72 60.0 6.12e-01 87.1% 100.0%
4196255 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.72 66.0 6.60e-01 98.0% 97.1%
3730985 10.1.1.65 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SKN1_KRE6_Sbg1 0.72 62.0 5.05e-01 90.0% 87.1%
145877 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.69 62.0 6.02e-01 95.0% 94.5%
4406352 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 42.0 5.23e-01 91.0% 96.8%
157199 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 49.0 5.60e-01 97.5% 96.6%
5046961 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.69 59.0 5.83e-01 94.0% 84.7%
3167540 10.1.1.19 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.68 61.0 5.74e-01 93.5% 94.0%
3797659 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.68 52.0 5.47e-01 94.0% 85.9%
3243572 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.68 47.0 5.48e-01 96.0% 97.9%
3513335 10.1.1.83 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Menorin_C 0.68 53.0 5.22e-01 81.1% 100.0%
2324014 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.65 52.0 5.44e-01 86.1% 88.8%
3849049 10.1.1.19 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.65 56.0 5.18e-01 90.5% 87.5%
1563554 10.1.1.53 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › G7C_C 0.65 51.0 5.21e-01 81.1% 98.4%
3910378 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 48.0 5.18e-01 76.1% 97.6%
4160181 10.1.1.23 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized 0.63 47.0 5.00e-01 76.6% 95.4%
4937335 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 48.0 5.24e-01 98.0% 94.1%
3742001 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 46.0 4.41e-01 76.6% 78.3%
5025469 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 39.0 4.73e-01 90.5% 100.0%
3917289 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 49.0 5.20e-01 85.1% 98.9%
1762256 10.32.1.51 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 0.58 37.0 4.48e-01 94.5% 96.2%
3703423 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 39.0 4.65e-01 80.1% 100.0%
3560244 10.32.1.223 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1 0.57 44.0 4.68e-01 89.6% 90.9%
3903309 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 48.0 4.86e-01 100.0% 90.5%
5082706 10.29.1.2 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins › Siphovirus-type_tail_C 0.56 34.0 4.23e-01 80.6% 99.2%
5073193 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.56 33.0 4.22e-01 91.0% 98.3%
3627940 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 36.0 4.38e-01 80.6% 100.0%
3199753 2002.1.1.33 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 0.51 39.0 2.88e-01 80.1% 31.8%