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NC_070947.1__YP_010666946.1__PQB83_gp68__00068
Bact-VirNC_070947.1__YP_010666946.1__PQB83_gp68__00068
Identity
- Accession:
- NC_070947 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 2250412
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-97
Domain cluster:
rep: NC_070877.1__YP_010660489.1__PP914_gp123__00123__D21-39_51-92
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 38.0 | 3.52e-01 | 100.0% | 39.6% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.72 | 33.0 | 3.83e-01 | 100.0% | 59.6% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.65 | 38.0 | 4.22e-01 | 86.5% | 73.7% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.64 | 49.0 | 4.00e-01 | 82.4% | 79.3% |
| 1cg2A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 51.0 | 3.57e-01 | 100.0% | 83.2% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 40.0 | 4.11e-01 | 71.6% | 92.9% |
| 1atiB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 39.0 | 3.51e-01 | 71.6% | 79.5% |
| 3lnbA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.57 | 49.0 | 3.40e-01 | 95.9% | 48.8% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 40.0 | 2.46e-01 | 74.3% | 27.7% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 40.0 | 4.00e-01 | 79.7% | 94.9% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 39.0 | 3.45e-01 | 75.7% | 69.3% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.84e-01 | 77.0% | 95.0% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 42.0 | 2.65e-01 | 89.2% | 75.6% |
| 3cwcA02 | 3.90.1510.10 | Alpha Beta › Alpha-Beta Complex › Glycerate kinase, domain 2 › Glycerate kinase, domain 2 | 0.54 | 45.0 | 3.23e-01 | 95.9% | 96.2% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 36.0 | 3.71e-01 | 71.6% | 97.2% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.31e-01 | 83.8% | 76.3% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 33.0 | 3.65e-01 | 71.6% | 84.2% |
| 3v9fA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.70e-01 | 89.2% | 81.9% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.67 | 36.0 | 3.70e-01 | 98.6% | 52.9% |
| 3523802 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 35.0 | 3.86e-01 | 98.6% | 61.7% |
| 3274237 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 44.0 | 2.90e-01 | 70.3% | 26.4% |
| 3721289 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.61 | 45.0 | 4.64e-01 | 89.2% | 82.9% |
| 1501287 | 601.52.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › FlgK_D1 | 0.60 | 51.0 | 3.61e-01 | 100.0% | 38.8% |
| 3934278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 3.93e-01 | 83.8% | 84.3% |
| 3471446 | 7579.1.1.81 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Arb2 | 0.58 | 46.0 | 3.16e-01 | 90.5% | 75.4% |
| 3212945 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 37.0 | 4.07e-01 | 86.5% | 81.4% |
| 5032200 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 41.0 | 3.68e-01 | 75.7% | 74.3% |
| 4661764 | 601.52.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › FlgK_D1 | 0.57 | 47.0 | 3.03e-01 | 91.9% | 27.4% |
| 3658860 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 34.0 | 2.43e-01 | 71.6% | 20.5% |
| 3394215 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 44.0 | 4.00e-01 | 85.1% | 90.0% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 41.0 | 4.15e-01 | 79.7% | 94.7% |
| 3968506 | 3859.1.1.0 ↗ | alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain | 0.56 | 44.0 | 4.00e-01 | 87.8% | 95.2% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 41.0 | 4.14e-01 | 79.7% | 94.7% |
| 3688824 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.56 | 39.0 | 3.65e-01 | 74.3% | 70.5% |
| 4133217 | 10.1.1.55 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PL28 | 0.56 | 46.0 | 3.25e-01 | 95.9% | 47.5% |
| 4403908 | 4.1.1.291 ↗ | beta barrels › SH3 › SH3 › SH3 › YNQ4_N | 0.56 | 30.0 | 3.63e-01 | 95.9% | 84.4% |
| 3165037 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.55 | 37.0 | 2.99e-01 | 70.3% | 42.7% |
| 3969910 | 3772.1.1.1 ↗ | beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR | 0.54 | 42.0 | 3.48e-01 | 83.8% | 62.3% |
| 3188402 | 4099.1.1.31 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF26204 | 0.53 | 37.0 | 2.86e-01 | 75.7% | 83.5% |
| 3253557 | 304.7.1.3 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Pro-kuma_activ | 0.53 | 44.0 | 4.02e-01 | 93.2% | 75.0% |
| 4963099 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 37.0 | 3.91e-01 | 86.5% | 87.7% |
| 1108143 | 3772.1.1.1 ↗ | beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR | 0.52 | 39.0 | 3.32e-01 | 82.4% | 80.3% |
| 3968774 | 3772.1.1.1 ↗ | beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR | 0.52 | 40.0 | 3.41e-01 | 85.1% | 82.3% |
| 3352484 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.52 | 35.0 | 2.24e-01 | 70.3% | 18.9% |
| 4046039 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.52 | 31.0 | 2.97e-01 | 91.9% | 50.6% |
| 4976136 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.52 | 39.0 | 3.65e-01 | 83.8% | 71.6% |
| 5016069 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.51 | 43.0 | 3.21e-01 | 95.9% | 45.9% |
| 4927275 | 211.1.1.24 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Ble-like_N | 0.51 | 41.0 | 3.46e-01 | 90.5% | 85.4% |
| 5074243 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 37.0 | 3.44e-01 | 78.4% | 77.9% |
| 3184113 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.51 | 43.0 | 3.95e-01 | 97.3% | 77.0% |
| 4353619 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.51 | 38.0 | 3.44e-01 | 79.7% | 89.9% |
| 3741169 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 41.0 | 2.88e-01 | 97.3% | 93.7% |
| 3509951 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.50 | 41.0 | 2.95e-01 | 91.9% | 97.4% |
| 3328759 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.50 | 40.0 | 4.06e-01 | 91.9% | 100.0% |