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NC_070949.1__YP_010667124.1__PQB85_gp38__00038
Bact-VirNC_070949.1__YP_010667124.1__PQB85_gp38__00038
Identity
- Accession:
- NC_070949 ↗
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Taxonomy
TaxID: 2663326
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-66
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.60 | 39.0 | 4.01e-01 | 100.0% | 69.2% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 39.0 | 3.57e-01 | 100.0% | 49.3% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 38.0 | 4.08e-01 | 100.0% | 78.3% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 2.98e-01 | 90.7% | 75.0% |
| 1jcfA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 41.0 | 3.86e-01 | 100.0% | 73.7% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 34.0 | 3.51e-01 | 100.0% | 71.2% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 26.0 | 3.16e-01 | 77.8% | 61.8% |
| 4b3xA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.66e-01 | 79.6% | 98.8% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 38.0 | 3.78e-01 | 100.0% | 76.3% |
| 2z73B01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 35.0 | 2.24e-01 | 75.9% | 39.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3667994 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.80 | 49.0 | 5.95e-01 | 94.4% | 100.0% |
| 4944040 | 375.2.1.0 ↗ | few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like | 0.76 | 38.0 | 4.17e-01 | 96.3% | 57.8% |
| 3881333 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.66 | 55.0 | 4.38e-01 | 100.0% | 45.2% |
| 3716962 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.64 | 53.0 | 3.82e-01 | 100.0% | 36.0% |
| 3705846 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 50.0 | 4.23e-01 | 100.0% | 60.0% |
| 3238367 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.60 | 43.0 | 3.90e-01 | 100.0% | 56.0% |
| 3553625 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 43.0 | 4.35e-01 | 100.0% | 83.6% |
| 3596936 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 45.0 | 4.22e-01 | 100.0% | 72.9% |
| 3917318 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 29.0 | 3.04e-01 | 94.4% | 54.0% |
| 4027509 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 43.0 | 4.35e-01 | 98.1% | 94.4% |
| 3527717 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 35.0 | 3.57e-01 | 90.7% | 75.5% |