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NC_070958.1__YP_010668925.1__PQC08_gp098__00177
Bact-VirNC_070958.1__YP_010668925.1__PQC08_gp098__00177
Identity
- Accession:
- NC_070958 ↗
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Taxonomy
TaxID: 2593322
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-120
Domain cluster:
rep: OM810292.1__UOX39536.1__X__00091__D8-133
D2
high
residues 167-268
D3
high
residues 273-426
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5a67A00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.85 | 81.0 | 7.20e-01 | 99.4% | 97.6% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.77 | 72.0 | 6.99e-01 | 99.4% | 100.0% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.74 | 67.0 | 6.88e-01 | 100.0% | 100.0% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.73 | 67.0 | 6.40e-01 | 98.7% | 98.9% |
| 3bgyA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.72 | 59.0 | 5.20e-01 | 87.7% | 91.6% |
| 1ksiA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 30.0 | 3.66e-01 | 71.4% | 77.1% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.57 | 31.0 | 3.97e-01 | 86.4% | 90.0% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 34.0 | 3.52e-01 | 87.7% | 67.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964752 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.83 | 78.0 | 7.73e-01 | 100.0% | 95.6% |
| 3602029 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.83 | 78.0 | 7.11e-01 | 99.4% | 94.9% |
| 5016100 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.78 | 74.0 | 6.89e-01 | 100.0% | 99.5% |
| 4965666 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.77 | 71.0 | 6.77e-01 | 98.7% | 100.0% |
| 5029530 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.77 | 72.0 | 6.73e-01 | 100.0% | 99.5% |
| 3388799 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.77 | 71.0 | 6.64e-01 | 98.7% | 93.5% |
| 4985112 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.76 | 71.0 | 6.70e-01 | 100.0% | 98.9% |
| 5027001 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.76 | 70.0 | 6.70e-01 | 98.7% | 100.0% |
| 4996503 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.76 | 71.0 | 6.54e-01 | 100.0% | 94.7% |
| 3387958 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.76 | 71.0 | 7.08e-01 | 99.4% | 100.0% |
| 5044050 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.76 | 70.0 | 6.89e-01 | 98.7% | 99.4% |
| 3932045 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.76 | 70.0 | 6.61e-01 | 99.4% | 97.8% |
| 5012336 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.75 | 70.0 | 6.76e-01 | 100.0% | 97.1% |
| 3425128 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.75 | 70.0 | 6.63e-01 | 100.0% | 92.8% |
| 4946177 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.74 | 67.0 | 6.45e-01 | 96.1% | 96.0% |
| 5035338 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.74 | 69.0 | 6.64e-01 | 98.7% | 100.0% |
| 5052357 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.74 | 69.0 | 6.39e-01 | 99.4% | 94.2% |
| 3937294 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.74 | 67.0 | 6.41e-01 | 99.4% | 97.2% |
| 3518771 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.73 | 68.0 | 6.46e-01 | 100.0% | 98.3% |
| 3306468 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.71 | 66.0 | 6.24e-01 | 98.7% | 90.6% |
| 3362111 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.71 | 66.0 | 6.01e-01 | 100.0% | 89.5% |
| 4953412 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 36.0 | 4.04e-01 | 99.4% | 76.8% |
| 4992199 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.58 | 34.0 | 4.36e-01 | 90.9% | 100.0% |
| 3788095 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.55 | 34.0 | 3.69e-01 | 100.0% | 70.4% |
| 1140712 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.54 | 33.0 | 3.64e-01 | 87.7% | 73.1% |
| 3704753 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 36.0 | 3.13e-01 | 70.8% | 89.2% |
| 3415714 | 79.1.1.23 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Chitin_bind_4 | 0.50 | 23.0 | 3.08e-01 | 85.1% | 82.7% |
D4
high
residues 433-503
Domain cluster:
rep: NC_048776.1__YP_009847545.1__HWC32_gp064__00064__D4-57
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13280.13 best | WYL | 23.8 | 5.00e-05 | 94.4% | 77.1% |