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NC_070958.1__YP_010668959.1__PQC08_gp064__00211

Bact-Vir

NC_070958.1__YP_010668959.1__PQC08_gp064__00211

Identity

Accession:
NC_070958 ↗
Kingdom:
phage

Quality

75.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Ludhianavirus› Aeromonas_phage_D6

TaxID: 2593322

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-68
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 44.0 3.82e-01 70.0% 42.4%
6ya6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 56.0 4.75e-01 100.0% 57.1%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 57.0 3.66e-01 100.0% 35.1%
3zh8C01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 40.0 3.22e-01 93.3% 31.3%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.65 51.0 3.29e-01 85.0% 31.2%
4owwB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 42.0 3.54e-01 76.7% 37.4%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 56.0 3.48e-01 100.0% 24.6%
4d9uA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 40.0 3.59e-01 95.0% 43.2%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 44.0 4.33e-01 95.0% 65.7%
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 41.0 3.67e-01 80.0% 44.3%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.64 47.0 5.14e-01 96.7% 100.0%
2xzsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 40.0 3.48e-01 96.7% 40.7%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 3.80e-01 81.7% 43.1%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 47.0 3.30e-01 81.7% 44.6%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.87e-01 95.0% 78.3%
4qnyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 42.0 3.39e-01 100.0% 35.3%
3kulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 42.0 3.74e-01 83.3% 48.3%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 52.0 3.34e-01 100.0% 22.8%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 52.0 3.34e-01 95.0% 29.6%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 48.0 3.51e-01 98.3% 31.3%
4aqcB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 42.0 3.62e-01 80.0% 44.8%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 41.0 3.57e-01 78.3% 43.8%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 52.0 3.38e-01 100.0% 27.1%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 40.0 3.32e-01 78.3% 36.2%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 44.0 3.34e-01 81.7% 56.5%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.59 50.0 3.33e-01 100.0% 39.8%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 43.0 4.13e-01 86.7% 69.0%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 46.0 4.34e-01 88.3% 74.3%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.15e-01 100.0% 35.1%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 51.0 4.03e-01 100.0% 83.3%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.58 50.0 3.71e-01 100.0% 71.8%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 50.0 3.19e-01 100.0% 23.5%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 50.0 3.99e-01 100.0% 84.6%
1t9mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 40.0 2.95e-01 80.0% 42.6%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 50.0 3.66e-01 100.0% 48.8%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 3.65e-01 100.0% 44.7%
6k3lB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 37.0 3.28e-01 85.0% 42.9%
6ygnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 39.0 3.30e-01 86.7% 40.7%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 47.0 3.08e-01 100.0% 27.5%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.56 45.0 4.24e-01 100.0% 72.2%
7e52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 48.0 3.82e-01 100.0% 80.5%
6cz4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 35.0 3.16e-01 85.0% 44.2%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.61e-01 100.0% 50.3%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 45.0 2.87e-01 100.0% 41.6%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.49e-01 100.0% 48.0%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.55 48.0 3.49e-01 98.3% 35.9%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 3.42e-01 78.3% 52.4%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.55 40.0 2.96e-01 80.0% 55.1%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 3.89e-01 95.0% 90.7%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 3.49e-01 78.3% 56.0%
1o7dE00 2.60.40.1360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 47.0 3.93e-01 100.0% 91.7%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 45.0 3.89e-01 100.0% 63.7%
1bebA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 48.0 3.53e-01 100.0% 44.2%
2hr0B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.70e-01 95.0% 78.0%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 42.0 2.81e-01 93.3% 19.5%
1b4rA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.18e-01 98.3% 78.8%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 4.03e-01 100.0% 82.3%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.10e-01 95.0% 84.1%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.62e-01 100.0% 51.6%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.52 42.0 3.68e-01 96.7% 60.2%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 43.0 3.21e-01 100.0% 41.8%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.20e-01 93.3% 69.7%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 38.0 3.07e-01 85.0% 43.8%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4076295 375.1.1.88 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ogr_Delta 0.74 52.0 5.37e-01 91.7% 80.0%
3820070 5.1.2.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FBA_1 0.73 52.0 3.45e-01 100.0% 20.0%
5055610 2008.1.1.16 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.71 49.0 3.77e-01 100.0% 32.6%
4150902 243.3.1.5 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.70 59.0 5.51e-01 98.3% 76.0%
4937869 3414.1.1.0 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.69 51.0 4.59e-01 100.0% 56.5%
4928794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 47.0 5.14e-01 91.7% 97.8%
3928536 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.68 49.0 4.51e-01 100.0% 58.7%
4025190 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.66 50.0 5.21e-01 100.0% 92.7%
4682108 243.3.1.5 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.65 56.0 5.08e-01 100.0% 71.8%
4272501 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 56.0 4.75e-01 100.0% 59.0%
3927948 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 39.0 3.69e-01 86.7% 48.0%
3183430 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 41.0 2.79e-01 95.0% 17.7%
4878713 331.3.1.42 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Mtb12_C 0.64 57.0 4.81e-01 100.0% 87.1%
3640668 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.64 56.0 4.44e-01 100.0% 93.6%
3940690 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 49.0 4.08e-01 83.3% 50.5%
3606265 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 53.0 3.17e-01 100.0% 22.0%
4022437 9.1.1.11 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.63 48.0 3.53e-01 98.3% 30.3%
3392759 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 54.0 3.36e-01 100.0% 24.9%
4330244 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.62 47.0 3.89e-01 100.0% 45.9%
3925471 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 38.0 3.89e-01 80.0% 63.3%
3857355 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 40.0 3.37e-01 76.7% 36.4%
4956351 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 40.0 2.42e-01 78.3% 8.5%
3844176 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 47.0 3.48e-01 98.3% 32.7%
4501723 4.8.1.45 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.61 47.0 4.82e-01 100.0% 92.7%
4159686 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 47.0 3.50e-01 98.3% 32.9%
3208756 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 53.0 3.94e-01 100.0% 55.0%
1564338 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.60 52.0 3.38e-01 100.0% 27.1%
3435911 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 45.0 3.73e-01 85.0% 44.5%
5080416 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.60 52.0 3.37e-01 100.0% 26.2%
3720280 719.2.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.60 53.0 4.19e-01 100.0% 56.8%
3690165 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.60 52.0 3.24e-01 100.0% 37.7%
3771046 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 39.0 2.25e-01 90.0% 6.5%
3716770 2.1.1.135 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.59 46.0 3.83e-01 83.3% 50.5%
4928905 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 51.0 3.70e-01 100.0% 57.8%
4969244 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.16e-01 100.0% 24.6%
4141727 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 46.0 3.93e-01 88.3% 59.0%
147044 3256.1.1.1 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain › BACOVA_N 0.59 45.0 4.71e-01 100.0% 96.2%
4825040 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.59 37.0 2.89e-01 70.0% 26.8%
5079413 5.1.3.272 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP 0.58 50.0 3.29e-01 100.0% 22.3%
3473693 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 41.0 3.04e-01 76.7% 35.4%
4995934 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.58 51.0 3.16e-01 100.0% 29.3%
4531826 2003.1.3.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.58 51.0 3.26e-01 100.0% 45.1%
3696503 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 40.0 2.55e-01 100.0% 12.9%
3868838 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.58 51.0 3.75e-01 100.0% 44.4%
3962202 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.58 50.0 4.09e-01 100.0% 62.6%
3645444 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 47.0 3.96e-01 100.0% 97.5%
3776069 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 50.0 3.73e-01 100.0% 48.1%
4102022 2003.1.3.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.57 50.0 3.09e-01 100.0% 43.8%
4558873 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.57 45.0 3.43e-01 90.0% 58.7%
4887870 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 49.0 3.64e-01 100.0% 42.4%
4510000 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 49.0 4.10e-01 100.0% 70.9%
3530891 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 48.0 4.06e-01 100.0% 64.2%
4491369 2003.1.3.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.57 49.0 3.15e-01 100.0% 41.6%
3684759 331.3.1.10 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL 0.57 46.0 3.35e-01 95.0% 31.8%
3851797 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 49.0 3.63e-01 100.0% 46.1%
None — 0.56 49.0 3.05e-01 100.0% 25.4%
4268775 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.56 48.0 3.87e-01 100.0% 52.0%
None — 0.56 49.0 3.19e-01 100.0% 59.3%
3996943 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.55 48.0 3.65e-01 98.3% 57.2%
1545158 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.55 45.0 3.56e-01 100.0% 74.3%
4031750 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.55 46.0 3.97e-01 98.3% 57.6%
3631383 2003.1.2.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.55 46.0 3.49e-01 100.0% 81.9%
5022599 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.54 36.0 3.14e-01 76.7% 40.0%
3173920 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 46.0 2.94e-01 100.0% 30.6%
5050697 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.54 40.0 4.20e-01 98.3% 98.0%
4680442 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 47.0 3.47e-01 100.0% 46.1%
3959845 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 48.0 2.95e-01 100.0% 17.3%
3304330 12.1.1.34 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 0.53 46.0 3.70e-01 98.3% 96.7%
4569355 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 40.0 2.44e-01 88.3% 11.5%
3586372 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.53 37.0 2.47e-01 83.3% 16.0%
4026643 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 41.0 3.73e-01 95.0% 62.4%
3784940 2.1.1.119 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM10_OB 0.52 40.0 2.93e-01 85.0% 65.1%
3710521 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.52 45.0 3.36e-01 100.0% 52.9%
3823102 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.52 43.0 3.44e-01 100.0% 95.7%
3277727 4.8.1.43 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.51 43.0 3.80e-01 100.0% 81.1%
3986406 213.1.1.64 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535 0.50 40.0 2.84e-01 93.3% 59.5%
D2 high residues 72-160
PDB
Domain cluster: rep: ON287375.1__UQT03322.1__YUBABA_01160__00116__D83-175
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 33.0 3.30e-01 71.9% 48.4%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.61 54.0 4.54e-01 100.0% 64.3%
7arcC01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.59 53.0 4.62e-01 100.0% 71.9%
6u8yK01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.58 49.0 4.17e-01 97.8% 55.2%
7x4nE01 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.58 46.0 3.15e-01 86.5% 71.2%
1vj7B02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.57 50.0 4.54e-01 97.8% 89.1%
7qprA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.56 50.0 4.39e-01 100.0% 81.5%
5b3pA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.56 50.0 4.37e-01 100.0% 69.4%
5wy8B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 3.94e-01 76.4% 89.8%
7z0sE01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.56 46.0 4.31e-01 97.8% 72.3%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 4.52e-01 97.8% 93.7%
1foeC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 48.0 3.93e-01 95.5% 62.7%
1sqiA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 41.0 3.38e-01 79.8% 82.6%
4xq7A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 48.0 4.07e-01 100.0% 76.9%
1cduA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.64e-01 70.8% 100.0%
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.54 41.0 3.64e-01 82.0% 82.4%
5hr9A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 48.0 4.53e-01 100.0% 96.3%
4mb4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 4.21e-01 96.6% 89.9%
4s3nA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 46.0 3.99e-01 100.0% 81.6%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 44.0 3.69e-01 93.3% 73.4%
4r6uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.83e-01 75.3% 87.5%
8bveB01 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.53 47.0 3.87e-01 100.0% 79.5%
7jrmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 4.18e-01 100.0% 94.6%
6fgcA01 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.52 46.0 3.71e-01 100.0% 73.5%
6bu2A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 42.0 3.58e-01 88.8% 96.0%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 44.0 3.34e-01 96.6% 52.3%
3wfoA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 43.0 3.63e-01 94.4% 58.0%
3wuyA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.50 42.0 3.05e-01 96.6% 62.7%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 42.0 3.01e-01 92.1% 35.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4500356 211.1.1.48 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › MpPF1 0.65 46.0 4.44e-01 73.0% 86.0%
3100772 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.61 35.0 3.59e-01 73.0% 57.0%
5044076 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.61 40.0 3.73e-01 100.0% 51.7%
4125128 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.59 50.0 4.15e-01 94.4% 55.0%
5034595 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.59 52.0 4.22e-01 100.0% 57.5%
4144799 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.59 29.0 3.17e-01 93.3% 54.3%
2774534 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.58 50.0 3.85e-01 98.9% 42.7%
4205144 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.58 51.0 4.29e-01 100.0% 56.8%
3276089 316.1.1.13 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RelA_SpoT 0.58 51.0 4.19e-01 100.0% 73.9%
1160776 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.58 36.0 4.02e-01 100.0% 82.4%
5062486 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.57 43.0 3.68e-01 79.8% 84.8%
3238071 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.57 36.0 2.96e-01 98.9% 32.6%
5748 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.57 49.0 3.95e-01 100.0% 49.2%
6824 316.1.1.13 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RelA_SpoT 0.57 50.0 4.33e-01 100.0% 80.0%
3937109 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 45.0 3.14e-01 88.8% 39.4%
3578149 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 48.0 4.13e-01 96.6% 83.4%
3248847 316.1.1.13 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RelA_SpoT 0.55 49.0 3.92e-01 100.0% 67.2%
3308208 2003.1.2.2 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N 0.55 48.0 3.20e-01 100.0% 64.8%
4379266 316.1.1.1 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol 0.54 46.0 3.79e-01 95.5% 58.2%
3259877 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.54 48.0 3.71e-01 100.0% 49.3%
4026205 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.54 45.0 3.50e-01 93.3% 90.5%
3589295 3414.1.1.1 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Big_3 0.53 41.0 4.38e-01 100.0% 98.7%
3997288 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.53 46.0 3.71e-01 100.0% 72.9%
5015343 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.53 46.0 3.84e-01 98.9% 80.0%
3912265 316.1.1.6 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 0.53 47.0 3.40e-01 98.9% 60.0%
3579448 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 45.0 4.21e-01 96.6% 85.2%
3273359 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.53 46.0 3.84e-01 98.9% 71.9%
3798506 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 40.0 2.81e-01 86.5% 59.1%
4681343 2.10.1.0 ↗ beta barrels › OB-fold › CheW › CheW 0.52 39.0 3.82e-01 79.8% 93.7%
259934 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.52 43.0 3.67e-01 95.5% 70.9%
3655146 221.1.2.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.52 43.0 4.29e-01 95.5% 89.5%
4499818 221.4.1.9 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.52 43.0 4.01e-01 95.5% 88.7%
3481161 2007.2.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.51 43.0 3.03e-01 92.1% 35.9%
3238942 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 42.0 2.91e-01 92.1% 32.7%
4460356 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.51 41.0 3.13e-01 94.4% 69.1%
3055856 6082.1.1.3 ↗ beta sandwiches › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like › N-terminal domain of BT_2081-like › PF29074 0.51 42.0 4.29e-01 97.8% 93.1%
3227010 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.50 42.0 2.91e-01 92.1% 32.9%
3856390 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.50 43.0 3.50e-01 98.9% 68.6%
3994608 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.50 42.0 3.19e-01 92.1% 52.1%
3936631 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.50 38.0 3.82e-01 85.4% 100.0%