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NC_070958.1__YP_010669002.1__PQC08_gp021__00254

Bact-Vir

NC_070958.1__YP_010669002.1__PQC08_gp021__00254

Identity

Accession:
NC_070958 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Ludhianavirus› Aeromonas_phage_D6

TaxID: 2593322

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-199
PDB
Domain cluster: rep: MZ501267.1__QZA70763.1__AH04_292__00291__D52-216
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 24.0 2.84e-01 78.4% 49.2%
1gkaB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 35.0 3.48e-01 82.0% 52.9%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 33.0 3.25e-01 83.8% 50.6%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 21.0 3.04e-01 78.4% 74.3%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 4.24e-01 91.0% 91.3%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 33.0 3.36e-01 83.2% 58.4%
3i6eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 30.0 3.65e-01 78.4% 92.2%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 24.0 2.67e-01 76.6% 55.5%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3819740 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.69 33.0 4.47e-01 89.2% 85.6%
3295575 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.65 33.0 4.15e-01 91.0% 80.0%
3393661 243.19.1.2 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › Chitin_bind_4 0.64 25.0 4.10e-01 97.6% 100.0%
3408795 12.1.1.60 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Chitin_bind_4 0.62 25.0 4.02e-01 98.2% 100.0%
138908 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.61 24.0 2.84e-01 78.4% 49.2%
4125244 3186.1.1.1 ↗ a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook 0.59 29.0 3.43e-01 99.4% 66.1%
3738504 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 27.0 3.32e-01 94.6% 65.5%
3396245 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.57 30.0 2.91e-01 73.7% 42.1%
5015593 3111.1.1.0 ↗ beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.56 32.0 3.77e-01 88.6% 77.5%
4196609 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.56 32.0 3.69e-01 77.2% 75.8%
4088781 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.56 30.0 2.99e-01 74.9% 47.8%
840 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 33.0 3.22e-01 83.2% 51.4%
3802306 284.1.2.0 ↗ a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.55 33.0 4.06e-01 86.8% 100.0%
4961667 5084.1.1.45 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF26421 0.55 31.0 3.65e-01 83.8% 78.3%
5079397 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 22.0 3.00e-01 99.4% 70.6%
3535752 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 36.0 3.85e-01 88.6% 80.0%
3318685 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.51 33.0 3.90e-01 86.2% 100.0%
869258 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.51 30.0 3.56e-01 78.4% 85.6%
6397 243.1.1.30 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4904 0.50 24.0 2.67e-01 76.6% 55.5%