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NC_070963.1__YP_010670294.1__PQC13_gp319__00319

Bact-Vir

NC_070963.1__YP_010670294.1__PQC13_gp319__00319

Identity

Accession:
NC_070963 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-89
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00124.25 best Photo_RC 33.2 4.70e-08 100.0% 19.6%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hzuS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 49.0 3.54e-01 100.0% 90.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4086750 3681.1.1.0 a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit 0.63 55.0 4.48e-01 100.0% 60.9%
4255464 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.63 55.0 3.66e-01 100.0% 28.6%
4886404 4042.1.1.1 a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6 0.63 55.0 3.72e-01 100.0% 31.8%
5040519 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 40.0 2.58e-01 81.4% 19.2%