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NC_070965.1__YP_010670631.1__PQC15_gp092__00092

Bact-Vir

NC_070965.1__YP_010670631.1__PQC15_gp092__00092

Identity

Accession:
NC_070965 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Makaravirus› Synechococcus_phage_S-H34

TaxID: 2718942

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-115
PDB
Domain cluster: rep: MH533020.1__AXN57854.1__X__00123__D5-128
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5zzjA02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.60 45.0 3.21e-01 79.6% 39.5%
3mekA04 1.25.40.970 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 30.0 3.25e-01 96.9% 57.5%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.58 30.0 3.27e-01 85.7% 58.2%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.56 41.0 3.29e-01 79.6% 57.8%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 29.0 3.18e-01 80.6% 60.2%
3mfnB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 39.0 3.60e-01 94.9% 60.3%
3bjoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.05e-01 83.7% 87.4%
1vnsA01 1.20.144.10 Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase 0.52 39.0 3.33e-01 81.6% 81.1%
2xi9A03 1.10.150.480 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 40.0 4.00e-01 86.7% 88.1%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.50 40.0 3.49e-01 87.8% 65.4%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4641447 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.61 43.0 4.20e-01 82.7% 66.4%
3714186 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.59 41.0 3.97e-01 79.6% 62.6%
4929648 5054.1.1.7 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA 0.59 46.0 4.58e-01 90.8% 81.0%
3886648 5054.1.1.1 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan 0.58 47.0 3.67e-01 89.8% 56.5%
4002118 5054.1.1.1 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan 0.57 46.0 4.08e-01 89.8% 76.0%
4396960 5054.1.1.7 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA 0.57 47.0 4.39e-01 91.8% 80.8%
4950286 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.57 42.0 4.15e-01 94.9% 72.2%
3579065 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.56 45.0 3.80e-01 89.8% 57.2%
4945072 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.56 38.0 2.82e-01 71.4% 98.6%
5064204 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 3.90e-01 94.9% 78.2%
5066086 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.54 44.0 4.06e-01 91.8% 69.2%
4370284 2004.1.1.226 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.53 42.0 3.16e-01 89.8% 51.1%
3276327 593.1.1.0 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.53 43.0 3.47e-01 90.8% 61.3%
3583412 148.1.3.17 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.51 35.0 3.36e-01 99.0% 60.0%