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NC_070966.1__YP_010670825.1__PQC16_gp040__00040
Bact-VirNC_070966.1__YP_010670825.1__PQC16_gp040__00040
Identity
- Accession:
- NC_070966 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kleczkowskaviridae›
Cuauhnahuacvirus›
Rhizobium_phage_RHph_TM30
TaxID: 2509764
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 73-124
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 45.0 | 3.73e-01 | 73.1% | 58.5% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 53.0 | 3.62e-01 | 100.0% | 44.1% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 48.0 | 3.46e-01 | 94.2% | 28.1% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 47.0 | 3.14e-01 | 80.8% | 71.2% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 4.68e-01 | 100.0% | 75.0% |
| 3dewA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 50.0 | 5.09e-01 | 100.0% | 98.1% |
| 3c2bA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 47.0 | 4.80e-01 | 88.5% | 100.0% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 4.59e-01 | 100.0% | 72.0% |
| 2i10A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 52.0 | 5.03e-01 | 100.0% | 90.0% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.61 | 43.0 | 3.63e-01 | 73.1% | 52.3% |
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 50.0 | 3.52e-01 | 100.0% | 30.9% |
| 3anpB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 51.0 | 3.52e-01 | 100.0% | 38.7% |
| 3kkdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 51.0 | 3.47e-01 | 100.0% | 25.8% |
| 2gfnA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 49.0 | 3.47e-01 | 100.0% | 30.2% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.47e-01 | 96.2% | 91.8% |
| 3jsjC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 50.0 | 3.54e-01 | 100.0% | 55.2% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 48.0 | 3.75e-01 | 100.0% | 38.3% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 49.0 | 3.69e-01 | 96.2% | 68.5% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 4.24e-01 | 94.2% | 71.8% |
| 5k7fA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 41.0 | 4.49e-01 | 84.6% | 100.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 47.0 | 4.57e-01 | 100.0% | 85.0% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 45.0 | 4.69e-01 | 86.5% | 95.7% |
| 1rktA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 41.0 | 4.17e-01 | 86.5% | 79.2% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 44.0 | 4.55e-01 | 84.6% | 91.7% |
| 3cdlA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 46.0 | 4.62e-01 | 94.2% | 98.1% |
| 4jkzA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 46.0 | 3.31e-01 | 100.0% | 29.1% |
| 2fbqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 48.0 | 3.27e-01 | 100.0% | 27.2% |
| 3sdgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 40.0 | 4.33e-01 | 84.6% | 95.2% |
| 2y30B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 44.0 | 4.35e-01 | 94.2% | 94.8% |
| 2iaiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 45.0 | 4.28e-01 | 100.0% | 78.5% |
| 2b1eA04 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.55 | 41.0 | 3.24e-01 | 86.5% | 53.5% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 44.0 | 4.30e-01 | 100.0% | 87.9% |
| 3b81A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 47.0 | 3.29e-01 | 98.1% | 28.4% |
| 2f07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 43.0 | 3.07e-01 | 100.0% | 26.0% |
| 6el2B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 42.0 | 4.34e-01 | 94.2% | 100.0% |
| 2g5gX01 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 3.08e-01 | 100.0% | 35.2% |
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 44.0 | 3.09e-01 | 100.0% | 26.4% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 3.39e-01 | 100.0% | 50.0% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 42.0 | 4.01e-01 | 96.2% | 73.5% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.84e-01 | 100.0% | 78.7% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 39.0 | 3.82e-01 | 100.0% | 76.3% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.78e-01 | 100.0% | 69.9% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.51 | 40.0 | 3.66e-01 | 98.1% | 100.0% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.92e-01 | 98.1% | 84.2% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3477001 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.71 | 62.0 | 4.47e-01 | 100.0% | 34.7% |
| 4143680 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.71 | 57.0 | 4.47e-01 | 100.0% | 40.8% |
| 3296862 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 56.0 | 5.08e-01 | 100.0% | 64.0% |
| 3206547 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 57.0 | 4.86e-01 | 100.0% | 54.4% |
| 3947986 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.70 | 51.0 | 4.93e-01 | 100.0% | 70.0% |
| 4927193 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.69 | 55.0 | 4.43e-01 | 100.0% | 44.8% |
| 3700785 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 5.50e-01 | 100.0% | 86.2% |
| 3454624 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.68 | 46.0 | 4.56e-01 | 94.2% | 67.3% |
| 3283117 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 56.0 | 4.94e-01 | 100.0% | 72.5% |
| 142581 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.65 | 54.0 | 4.91e-01 | 100.0% | 76.3% |
| 5073852 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 51.0 | 3.98e-01 | 100.0% | 38.4% |
| 3283805 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 54.0 | 4.99e-01 | 100.0% | 80.0% |
| 3662896 | 101.1.1.411 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 | 0.63 | 54.0 | 4.14e-01 | 100.0% | 68.0% |
| 3279079 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.62 | 53.0 | 4.72e-01 | 100.0% | 71.2% |
| 3708899 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.62 | 49.0 | 3.83e-01 | 100.0% | 40.0% |
| 3592885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 50.0 | 4.86e-01 | 100.0% | 95.0% |
| 4262267 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.61 | 51.0 | 4.74e-01 | 100.0% | 82.9% |
| 3959857 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 49.0 | 4.69e-01 | 96.2% | 86.2% |
| 5031727 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.61 | 52.0 | 4.37e-01 | 100.0% | 78.9% |
| 4927473 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.61 | 51.0 | 4.45e-01 | 100.0% | 85.9% |
| 5080838 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.61 | 47.0 | 4.64e-01 | 100.0% | 81.7% |
| 3596692 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 49.0 | 3.69e-01 | 100.0% | 36.2% |
| 3281798 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.60 | 50.0 | 4.63e-01 | 100.0% | 82.9% |
| 3974144 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.60 | 51.0 | 4.61e-01 | 100.0% | 77.3% |
| 3288092 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.60 | 51.0 | 4.28e-01 | 100.0% | 57.9% |
| 5027756 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 47.0 | 4.81e-01 | 98.1% | 98.0% |
| 1103020 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.60 | 50.0 | 4.61e-01 | 100.0% | 80.6% |
| 3283699 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.59 | 52.0 | 4.62e-01 | 100.0% | 76.0% |
| 3281362 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.59 | 49.0 | 4.55e-01 | 100.0% | 78.6% |
| 3224878 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.59 | 51.0 | 4.33e-01 | 100.0% | 77.8% |
| 4875606 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.59 | 50.0 | 4.57e-01 | 100.0% | 75.7% |
| 4258132 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.59 | 46.0 | 4.02e-01 | 98.1% | 53.7% |
| 3587524 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.04e-01 | 100.0% | 56.0% |
| 3284307 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.58 | 44.0 | 4.48e-01 | 84.6% | 100.0% |
| 3987741 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.58 | 48.0 | 4.27e-01 | 100.0% | 66.3% |
| 4284318 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.58 | 47.0 | 4.35e-01 | 100.0% | 77.3% |
| 3397049 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.57 | 46.0 | 3.78e-01 | 96.2% | 78.0% |
| 5077614 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.57 | 43.0 | 3.91e-01 | 96.2% | 60.0% |
| 4192947 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.57 | 47.0 | 3.45e-01 | 100.0% | 35.8% |
| 4259069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 46.0 | 3.24e-01 | 100.0% | 25.5% |
| 4991913 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.57 | 49.0 | 3.26e-01 | 98.1% | 25.6% |
| 4131842 | 101.1.3.25 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r3 | 0.56 | 44.0 | 3.89e-01 | 84.6% | 68.0% |
| 4972573 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 2.81e-01 | 94.2% | 13.6% |
| 5067843 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.56 | 43.0 | 4.40e-01 | 90.4% | 98.0% |
| 3711217 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.55 | 44.0 | 4.22e-01 | 100.0% | 89.2% |
| 4452303 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 48.0 | 4.52e-01 | 100.0% | 83.1% |
| 3971933 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 44.0 | 4.16e-01 | 98.1% | 72.3% |
| 3664504 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.54 | 42.0 | 3.18e-01 | 96.2% | 67.7% |
| 3579249 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 44.0 | 3.89e-01 | 100.0% | 74.1% |
| 4076621 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.53 | 44.0 | 4.51e-01 | 90.4% | 96.0% |
| 4546696 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.52 | 42.0 | 3.71e-01 | 100.0% | 78.9% |
| 3283630 | 601.7.1.18 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_SAV_6107 | 0.50 | 40.0 | 3.16e-01 | 88.5% | 61.8% |
D2
medium
residues 1-72
Domain cluster:
rep: Salt_Pond_R2_restored_H2O_MG_scaffold_3_prodigal-single.1__X__X__00391__D54-111
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2csvA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.74 | 42.0 | 4.24e-01 | 83.3% | 56.9% |
| 2yvrA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.72 | 39.0 | 4.80e-01 | 76.4% | 86.7% |
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.69 | 39.0 | 4.70e-01 | 76.4% | 90.9% |
| 4tn3A01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.68 | 38.0 | 4.71e-01 | 83.3% | 97.5% |
| 2djaA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 40.0 | 3.85e-01 | 86.1% | 52.4% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 43.0 | 3.89e-01 | 80.6% | 49.5% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.65 | 45.0 | 5.05e-01 | 72.2% | 94.5% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 46.0 | 5.01e-01 | 87.5% | 93.2% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 45.0 | 4.61e-01 | 86.1% | 79.7% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 44.0 | 4.73e-01 | 91.7% | 93.4% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 45.0 | 4.60e-01 | 86.1% | 84.1% |
| 6k2kA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 41.0 | 4.49e-01 | 79.2% | 91.2% |
| 1totA00 | 3.30.60.90 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Zinc finger, ZZ-type | 0.59 | 38.0 | 4.14e-01 | 80.6% | 88.5% |
| 2ldrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 42.0 | 4.07e-01 | 88.9% | 67.1% |
| 2ffwA00 | 4.10.830.40 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › | 0.58 | 42.0 | 4.13e-01 | 84.7% | 70.5% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 44.0 | 4.43e-01 | 88.9% | 83.1% |
| 2dsmA00 | 3.30.40.30 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › YqaI domain | 0.57 | 37.0 | 3.80e-01 | 79.2% | 68.1% |
| 2y43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 41.0 | 3.89e-01 | 88.9% | 65.9% |
| 5d0iB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 35.0 | 3.96e-01 | 77.8% | 92.2% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 36.0 | 3.78e-01 | 72.2% | 76.6% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 37.0 | 3.95e-01 | 83.3% | 88.1% |
| 2l0bA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 37.0 | 3.46e-01 | 72.2% | 63.7% |
| 4v3lC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 36.0 | 3.73e-01 | 72.2% | 75.4% |
| 2yu4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 40.0 | 3.74e-01 | 86.1% | 70.2% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3802787 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.81 | 45.0 | 5.80e-01 | 75.0% | 100.0% |
| 3874356 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.80 | 49.0 | 6.06e-01 | 77.8% | 100.0% |
| 3662931 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.80 | 48.0 | 5.56e-01 | 76.4% | 86.0% |
| 3759578 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.80 | 48.0 | 5.25e-01 | 77.8% | 73.3% |
| 3305957 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.80 | 48.0 | 5.42e-01 | 76.4% | 80.0% |
| 3520329 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.80 | 46.0 | 5.69e-01 | 72.2% | 93.3% |
| 3670642 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.79 | 50.0 | 5.24e-01 | 77.8% | 70.8% |
| 3885685 | 904.1.1.11 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP | 0.79 | 46.0 | 5.67e-01 | 73.6% | 93.3% |
| 3806562 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.79 | 49.0 | 5.95e-01 | 77.8% | 100.0% |
| 3357823 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.79 | 50.0 | 5.40e-01 | 77.8% | 76.7% |
| 3522307 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.79 | 48.0 | 5.79e-01 | 76.4% | 97.8% |
| 4024131 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.79 | 49.0 | 5.65e-01 | 76.4% | 90.0% |
| 3345514 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.78 | 49.0 | 5.74e-01 | 83.3% | 92.0% |
| 3408360 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.78 | 45.0 | 5.49e-01 | 75.0% | 93.3% |
| 3580845 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.78 | 50.0 | 5.80e-01 | 76.4% | 94.0% |
| 3229366 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.77 | 48.0 | 5.37e-01 | 77.8% | 81.8% |
| 3890045 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.77 | 46.0 | 5.52e-01 | 72.2% | 95.6% |
| 3890373 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.76 | 47.0 | 5.48e-01 | 83.3% | 90.0% |
| 3221207 | 376.1.6.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-B_box | 0.76 | 46.0 | 5.58e-01 | 79.2% | 97.8% |
| 3746408 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.76 | 47.0 | 5.65e-01 | 76.4% | 100.0% |
| 3806578 | 376.1.1.59 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-B_box | 0.76 | 43.0 | 5.24e-01 | 73.6% | 91.1% |
| 3502901 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.75 | 47.0 | 5.50e-01 | 76.4% | 93.9% |
| 3594276 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.75 | 46.0 | 5.57e-01 | 81.9% | 100.0% |
| 3364276 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.74 | 46.0 | 5.39e-01 | 73.6% | 92.0% |
| 3522312 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.74 | 49.0 | 5.60e-01 | 77.8% | 90.9% |
| 3474551 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.73 | 48.0 | 5.19e-01 | 77.8% | 81.7% |
| 3411064 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 48.0 | 5.65e-01 | 83.3% | 100.0% |
| 3433555 | 904.1.1.5 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PLATZ | 0.72 | 43.0 | 4.05e-01 | 80.6% | 50.0% |
| 3895529 | 904.1.1.35 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP_var | 0.72 | 44.0 | 5.23e-01 | 76.4% | 100.0% |
| 3806561 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 47.0 | 4.81e-01 | 79.2% | 70.0% |
| 4190899 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.71 | 42.0 | 3.13e-01 | 81.9% | 24.7% |
| 3882035 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.70 | 45.0 | 4.72e-01 | 77.8% | 72.3% |
| 3897441 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.69 | 47.0 | 4.90e-01 | 83.3% | 76.9% |
| 3895783 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.67 | 42.0 | 4.77e-01 | 77.8% | 92.0% |
| 3361545 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.65 | 54.0 | 4.52e-01 | 88.9% | 73.9% |
| 4148983 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 47.0 | 4.96e-01 | 86.1% | 84.6% |
| 3312159 | 904.1.1.27 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box, ANCHR-like_BBOX | 0.63 | 53.0 | 4.63e-01 | 90.3% | 84.8% |
| 1735822 | 376.1.1.35 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_14 | 0.63 | 46.0 | 4.16e-01 | 77.8% | 73.0% |
| 4529546 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 45.0 | 3.94e-01 | 84.7% | 51.4% |
| 4853380 | 376.1.1.35 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_14 | 0.63 | 45.0 | 4.26e-01 | 75.0% | 69.4% |
| 3485528 | 5046.1.1.194 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › zf-C3HC4 | 0.63 | 45.0 | 3.06e-01 | 86.1% | 21.2% |
| 3867225 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.63 | 45.0 | 4.38e-01 | 88.9% | 68.8% |
| 3570018 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 45.0 | 2.93e-01 | 86.1% | 17.5% |
| 4564843 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 45.0 | 3.87e-01 | 86.1% | 48.2% |
| 4630831 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 44.0 | 4.11e-01 | 84.7% | 60.0% |
| 3690337 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.62 | 46.0 | 4.63e-01 | 86.1% | 77.3% |
| 1886978 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 44.0 | 4.26e-01 | 88.9% | 67.1% |
| 4028243 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.61 | 43.0 | 4.55e-01 | 75.0% | 86.2% |
| 4488278 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.61 | 45.0 | 3.72e-01 | 84.7% | 43.8% |
| 3601028 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 45.0 | 4.90e-01 | 84.7% | 96.7% |
| 4595968 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 45.0 | 4.77e-01 | 88.9% | 89.2% |
| 4669021 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.60 | 45.0 | 3.78e-01 | 88.9% | 46.4% |
| 4161387 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.60 | 37.0 | 3.93e-01 | 81.9% | 73.3% |
| 3451778 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.59 | 46.0 | 3.81e-01 | 87.5% | 50.4% |
| 3229025 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 42.0 | 4.18e-01 | 84.7% | 73.3% |
| 3741503 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.57 | 44.0 | 3.93e-01 | 83.3% | 66.7% |
| 3503755 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 43.0 | 4.70e-01 | 81.9% | 100.0% |
| 4028785 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 44.0 | 4.28e-01 | 84.7% | 76.2% |
| 3593825 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 44.0 | 4.21e-01 | 84.7% | 82.4% |
| 4028171 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 40.0 | 4.00e-01 | 76.4% | 74.7% |
| 3397204 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 42.0 | 3.81e-01 | 83.3% | 59.0% |
| 4157459 | 377.1.1.12 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 | 0.54 | 49.0 | 3.70e-01 | 100.0% | 79.4% |
| 3596936 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 43.0 | 4.39e-01 | 86.1% | 100.0% |
| 3630268 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 40.0 | 3.67e-01 | 88.9% | 63.8% |
| 3725183 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.52 | 46.0 | 3.81e-01 | 100.0% | 63.3% |
| 3708084 | 376.1.1.18 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-ANAPC11 | 0.51 | 38.0 | 3.76e-01 | 79.2% | 88.0% |