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NC_070967.1__YP_010671309.1__PQC17_gp160__00160

Bact-Vir

NC_070967.1__YP_010671309.1__PQC17_gp160__00160

Identity

Accession:
NC_070967 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-93
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.69 58.0 3.83e-01 100.0% 22.5%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 47.0 3.97e-01 70.7% 94.7%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.68 62.0 4.10e-01 100.0% 28.3%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.67 51.0 4.48e-01 81.7% 94.2%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 54.0 3.61e-01 100.0% 22.1%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 58.0 3.82e-01 100.0% 38.6%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 59.0 3.73e-01 100.0% 30.3%
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.65 50.0 3.89e-01 82.9% 39.1%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 57.0 3.77e-01 100.0% 31.2%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 57.0 3.82e-01 100.0% 29.8%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 57.0 3.88e-01 100.0% 27.8%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 57.0 3.79e-01 100.0% 26.1%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.63 42.0 4.15e-01 74.4% 63.6%
1wlgA02 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.62 50.0 4.24e-01 89.0% 68.6%
3ozqA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 45.0 3.56e-01 75.6% 66.1%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 55.0 3.67e-01 100.0% 39.2%
3wmyA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 55.0 3.73e-01 100.0% 40.1%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 45.0 3.17e-01 76.8% 96.9%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 54.0 3.68e-01 100.0% 26.7%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.61 44.0 4.53e-01 76.8% 98.7%
2z3zA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.60 53.0 3.39e-01 100.0% 20.3%
4kc5C03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.60 47.0 3.14e-01 82.9% 74.2%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 41.0 3.57e-01 70.7% 64.8%
3gwiA00 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.60 51.0 4.11e-01 96.3% 90.9%
5hw3A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 46.0 3.30e-01 86.6% 79.9%
2xu7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 53.0 3.44e-01 100.0% 25.0%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.58 41.0 3.49e-01 80.5% 43.8%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.71e-01 76.8% 93.5%
1oh1A00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.57 41.0 3.83e-01 79.3% 67.0%
5ksdA04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.56 44.0 3.72e-01 87.8% 67.6%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.54 42.0 2.97e-01 82.9% 43.4%
1ig8A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 37.0 3.19e-01 70.7% 92.5%
6fhvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.62e-01 74.4% 96.9%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 38.0 3.13e-01 76.8% 47.8%
1oo0A00 3.30.1560.10 Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi 0.53 40.0 3.32e-01 80.5% 91.7%
7qrlA01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.52 42.0 3.52e-01 86.6% 77.0%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.90e-01 100.0% 26.9%
3hduA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 3.64e-01 100.0% 88.2%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036626 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.74 57.0 3.61e-01 93.9% 16.6%
3229131 5.1.5.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.73 60.0 4.09e-01 97.6% 26.1%
4026604 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.72 58.0 5.25e-01 92.7% 64.5%
5021930 4312.1.1.22 a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 0.71 55.0 5.14e-01 81.7% 92.0%
3173290 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.70 56.0 3.63e-01 100.0% 18.8%
3793643 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 62.0 3.77e-01 100.0% 18.0%
1318584 5.1.4.418 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lactonase 0.68 61.0 4.00e-01 100.0% 31.9%
None 0.68 57.0 3.59e-01 100.0% 18.5%
3374672 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.68 53.0 3.40e-01 100.0% 17.7%
3809666 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 53.0 3.02e-01 100.0% 8.6%
3990338 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 55.0 3.85e-01 100.0% 27.3%
3750387 5.1.4.166 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 0.67 59.0 3.73e-01 100.0% 19.8%
3303573 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 52.0 3.39e-01 100.0% 19.2%
3309658 5.1.4.44 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 0.66 57.0 3.80e-01 100.0% 23.9%
5079117 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 60.0 4.06e-01 100.0% 32.6%
3695223 5.1.4.515 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26607 0.65 54.0 3.49e-01 100.0% 20.3%
3392759 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 55.0 3.64e-01 100.0% 21.6%
3490298 10.12.1.86 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_NOL9 0.65 46.0 3.47e-01 73.2% 97.4%
3477607 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 58.0 3.34e-01 100.0% 23.2%
3926989 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 58.0 3.83e-01 100.0% 32.5%
3781319 5.1.3.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.64 57.0 3.88e-01 100.0% 30.0%
3392352 192.19.1.6 alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › eIF2A 0.64 58.0 3.61e-01 100.0% 23.3%
3638345 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 58.0 3.67e-01 100.0% 25.4%
3697470 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 57.0 3.60e-01 100.0% 32.6%
3735222 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 57.0 3.58e-01 100.0% 32.8%
3524156 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 56.0 3.74e-01 100.0% 31.2%
4854908 5.1.4.325 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30552 0.63 45.0 4.84e-01 78.0% 88.6%
3239992 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 53.0 4.12e-01 93.9% 46.5%
3404508 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 57.0 3.74e-01 100.0% 35.2%
4974435 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.63 48.0 4.63e-01 82.9% 87.4%
3781182 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 55.0 3.47e-01 100.0% 18.4%
4588425 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 55.0 3.64e-01 100.0% 27.3%
4939442 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 51.0 3.47e-01 100.0% 23.9%
4648495 5.1.3.48 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 0.62 55.0 3.90e-01 100.0% 39.2%
3243860 331.15.1.4 a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › FTH 0.62 44.0 3.60e-01 74.4% 56.1%
3670270 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 52.0 3.64e-01 100.0% 28.1%
3995015 5.1.4.241 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A 0.62 55.0 3.88e-01 100.0% 33.5%
3606287 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 54.0 3.59e-01 100.0% 24.6%
3261529 5.1.5.27 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N 0.61 54.0 3.50e-01 100.0% 38.7%
3412186 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 54.0 3.67e-01 100.0% 35.2%
3463588 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 53.0 3.49e-01 100.0% 22.7%
3273846 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 53.0 3.67e-01 100.0% 29.0%
3433350 5.3.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.61 48.0 4.02e-01 84.1% 74.3%
3255575 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 53.0 3.62e-01 100.0% 33.4%
4029617 5.1.11.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 0.61 54.0 3.41e-01 100.0% 25.7%
3429037 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 53.0 3.60e-01 100.0% 28.6%
3252223 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 53.0 3.54e-01 100.0% 33.1%
3291529 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 49.0 4.55e-01 91.5% 68.5%
3267108 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.61 50.0 3.33e-01 92.7% 81.9%
3459823 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 52.0 3.66e-01 100.0% 29.1%
3230405 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 50.0 3.26e-01 100.0% 18.9%
4193845 5.1.4.279 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26550 0.60 53.0 3.50e-01 100.0% 41.1%
4528984 222.1.1.38 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH, PKS_DH_N 0.60 47.0 3.17e-01 82.9% 69.8%
3436853 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.60 54.0 3.57e-01 100.0% 40.3%
3202006 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 53.0 3.44e-01 100.0% 29.9%
3906313 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 53.0 3.45e-01 100.0% 30.1%
3659734 5.1.4.262 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.60 52.0 3.33e-01 100.0% 24.4%
3831822 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.03e-01 100.0% 10.9%
3665188 5.1.5.131 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_CAF1B_HIR1 0.59 53.0 3.39e-01 100.0% 26.6%
3841986 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 52.0 3.62e-01 100.0% 34.1%
5018044 5.1.3.20 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 0.59 51.0 3.46e-01 100.0% 79.7%
3967202 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.59 43.0 4.01e-01 78.0% 90.5%
3295575 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.59 44.0 4.18e-01 80.5% 79.0%
3819740 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.58 44.0 4.30e-01 81.7% 88.9%
3625494 210.1.2.8 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 0.58 44.0 3.03e-01 80.5% 39.6%
4342106 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 51.0 3.41e-01 100.0% 44.2%
4083083 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 51.0 3.48e-01 100.0% 40.0%
3962288 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 41.0 3.57e-01 76.8% 57.7%
3282412 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.57 46.0 4.14e-01 93.9% 89.4%
3318685 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.56 43.0 3.98e-01 81.7% 76.2%
5038410 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 48.0 3.41e-01 100.0% 31.5%
3455331 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.55 48.0 3.17e-01 100.0% 31.6%
4021982 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 48.0 3.21e-01 96.3% 89.4%
3375268 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.55 39.0 2.88e-01 74.4% 93.2%
134473 210.1.2.4 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT 0.54 42.0 2.97e-01 82.9% 43.4%
4827586 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.52 39.0 2.86e-01 80.5% 37.4%
4627197 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.52 44.0 3.65e-01 100.0% 69.1%
3262383 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.52 41.0 3.47e-01 85.4% 95.6%