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NC_070967.1__YP_010671390.1__PQC17_gp241__00241

Bact-Vir

NC_070967.1__YP_010671390.1__PQC17_gp241__00241

Identity

Accession:
NC_070967 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-69
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.61 49.0 4.13e-01 94.2% 58.5%
2xzmG00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.52 33.0 2.43e-01 78.3% 22.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3756089 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.79 39.0 3.73e-01 91.3% 42.5%
3973966 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 58.0 5.23e-01 92.8% 71.0%
3615006 1189.1.1.1 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › Trypan_glycop 0.61 55.0 3.44e-01 98.6% 74.2%
3869401 376.1.3.4 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 0.56 51.0 4.01e-01 100.0% 49.3%