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NC_070967.1__YP_010671460.1__PQC17_gp330__00311
Bact-VirNC_070967.1__YP_010671460.1__PQC17_gp330__00311
Identity
- Accession:
- NC_070967 ↗
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kleczkowskaviridae›
Cuauhnahuacvirus›
Rhizobium_phage_RHph_Y65
TaxID: 2509785
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-97
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 35.0 | 2.99e-01 | 100.0% | 39.9% |
| 2debA03 | 3.30.559.70 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 | 0.52 | 43.0 | 3.24e-01 | 95.8% | 90.1% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.56e-01 | 98.9% | 69.5% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 34.0 | 3.32e-01 | 80.0% | 60.4% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 32.0 | 3.11e-01 | 85.3% | 56.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3474254 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.63 | 27.0 | 2.39e-01 | 70.5% | 29.6% |
| 5025174 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.62 | 24.0 | 2.75e-01 | 90.5% | 44.3% |
| 3396714 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 36.0 | 3.13e-01 | 70.5% | 39.3% |
| 4527322 | 223.2.1.18 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 | 0.51 | 39.0 | 3.17e-01 | 88.4% | 42.2% |
| 3648828 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.51 | 37.0 | 3.30e-01 | 75.8% | 95.6% |
| 3990696 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 36.0 | 2.93e-01 | 75.8% | 94.0% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.51 | 36.0 | 2.84e-01 | 82.1% | 35.0% |
| 4059884 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.50 | 44.0 | 3.35e-01 | 100.0% | 98.8% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.50 | 33.0 | 3.17e-01 | 87.4% | 55.7% |
| 5005203 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.50 | 21.0 | 2.25e-01 | 86.3% | 42.5% |