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NC_070970.1__YP_010671692.1__PQC31_gp19__00019

Bact-Vir

NC_070970.1__YP_010671692.1__PQC31_gp19__00019

Identity

Accession:
NC_070970 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Iggyvirus› Pseudomonas_phage_Iggy

TaxID: 2592193

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-60
PDB
Domain cluster: rep: MZ911962.1__WNV45434.1__X__00032__D4-47
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d6yA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 51.0 3.69e-01 96.7% 30.1%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.79e-01 96.7% 80.2%
2guhB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 54.0 3.87e-01 100.0% 51.7%
4jb3A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 46.0 4.42e-01 83.3% 81.9%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.61 51.0 4.52e-01 100.0% 84.0%
6teyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.52e-01 91.7% 97.3%
2rekA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 49.0 3.66e-01 100.0% 34.3%
3qkxB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 50.0 3.60e-01 98.3% 56.4%
5g5gA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.58 46.0 4.10e-01 91.7% 78.9%
4mk6A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 49.0 3.53e-01 100.0% 33.5%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 45.0 4.58e-01 95.0% 95.0%
3nrgA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 45.0 3.22e-01 100.0% 47.5%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 43.0 3.55e-01 91.7% 52.1%
2pmqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 39.0 3.15e-01 91.7% 38.0%
1pxyB03 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.52 36.0 2.99e-01 75.0% 85.6%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.52 42.0 3.11e-01 90.0% 37.2%
3k9dA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.51 42.0 3.09e-01 96.7% 48.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3482928 101.1.2.109 ↗ alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.64 53.0 5.11e-01 93.3% 94.3%
2705 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.63 53.0 4.81e-01 96.7% 81.2%
3223404 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 51.0 4.03e-01 100.0% 62.9%
3289937 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.60 51.0 4.52e-01 100.0% 65.6%
4011519 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 45.0 4.55e-01 83.3% 86.7%
3710929 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 44.0 3.17e-01 83.3% 52.8%
3286383 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.58 50.0 4.69e-01 100.0% 80.0%
3966271 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 49.0 4.76e-01 100.0% 85.7%
3191621 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 43.0 4.48e-01 83.3% 90.9%
4011227 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 43.0 4.23e-01 83.3% 76.9%
4968579 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 47.0 3.17e-01 100.0% 83.0%
5027756 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.55 41.0 4.26e-01 95.0% 100.0%
4061700 101.1.1.312 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Ustilago_mating, Homeobox_KN 0.55 43.0 3.37e-01 90.0% 48.3%
3816172 109.4.1.526 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc 0.53 42.0 2.57e-01 91.7% 11.7%
3751116 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.51 42.0 4.14e-01 98.3% 92.3%
4388318 161.1.1.1 ↗ alpha complex topology › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › SecA_SW 0.50 39.0 2.78e-01 90.0% 26.5%
D2 medium residues 163-222
PDB
Domain cluster: representative