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NC_070970.1__YP_010671749.1__PQC31_gp76__00076
Bact-VirNC_070970.1__YP_010671749.1__PQC31_gp76__00076
Identity
- Accession:
- NC_070970 ↗
- Kingdom:
- phage
Quality
60.9
mean pLDDT
Taxonomy
TaxID: 2592193
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.71 | 56.0 | 3.83e-01 | 85.5% | 93.0% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 48.0 | 3.05e-01 | 72.5% | 43.8% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.69 | 51.0 | 3.06e-01 | 78.3% | 32.3% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 63.0 | 3.92e-01 | 100.0% | 43.0% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 4.31e-01 | 71.0% | 77.3% |
| 6ygnA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 3.58e-01 | 75.4% | 99.1% |
| 4gakA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 47.0 | 3.20e-01 | 89.9% | 29.6% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 50.0 | 3.22e-01 | 98.6% | 89.8% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 44.0 | 3.19e-01 | 88.4% | 36.9% |
| 2cn2A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 48.0 | 2.99e-01 | 98.6% | 87.5% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.52 | 39.0 | 4.04e-01 | 91.3% | 89.4% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 40.0 | 2.89e-01 | 89.9% | 43.8% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.22e-01 | 100.0% | 69.5% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.50 | 43.0 | 3.89e-01 | 100.0% | 80.8% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 41.0 | 3.44e-01 | 95.7% | 91.6% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034088 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.80 | 52.0 | 3.94e-01 | 71.0% | 30.7% |
| 3199763 | 220.1.1.202 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N | 0.77 | 53.0 | 4.29e-01 | 71.0% | 61.6% |
| 3701487 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.71 | 49.0 | 3.18e-01 | 71.0% | 43.0% |
| 3723616 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.68 | 54.0 | 3.32e-01 | 87.0% | 96.9% |
| 3167972 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 62.0 | 3.44e-01 | 100.0% | 17.1% |
| 2577096 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.68 | 50.0 | 3.21e-01 | 78.3% | 46.1% |
| 3177251 | 216.1.1.41 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › PF29959 | 0.67 | 49.0 | 3.77e-01 | 78.3% | 80.0% |
| 3796352 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 47.0 | 4.91e-01 | 76.8% | 95.4% |
| 2491145 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.65 | 59.0 | 3.48e-01 | 100.0% | 29.9% |
| None | — | 0.65 | 44.0 | 2.97e-01 | 71.0% | 42.5% | |
| 1153941 | 243.4.1.2 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbG_N | 0.65 | 44.0 | 3.99e-01 | 71.0% | 57.3% |
| 3626089 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.65 | 44.0 | 2.56e-01 | 71.0% | 15.9% |
| 3743299 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.64 | 44.0 | 3.78e-01 | 71.0% | 50.9% |
| 4017539 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.62 | 56.0 | 3.54e-01 | 100.0% | 38.5% |
| 3513186 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.62 | 49.0 | 4.53e-01 | 85.5% | 83.3% |
| 4263663 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.62 | 48.0 | 3.68e-01 | 84.1% | 96.9% |
| 5079486 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 47.0 | 3.80e-01 | 84.1% | 49.3% |
| 3739432 | 241.1.1.12 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CCDC47 | 0.60 | 49.0 | 3.52e-01 | 91.3% | 88.7% |
| 5037496 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 51.0 | 4.01e-01 | 95.7% | 91.0% |
| 4033743 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.59 | 44.0 | 4.17e-01 | 82.6% | 83.5% |
| 3802876 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.58 | 47.0 | 3.02e-01 | 87.0% | 95.6% |
| 3513651 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.58 | 44.0 | 3.76e-01 | 81.2% | 77.3% |
| 3519579 | 295.1.1.20 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 | 0.58 | 47.0 | 4.57e-01 | 94.2% | 91.3% |
| 3832491 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.58 | 47.0 | 3.03e-01 | 88.4% | 94.1% |
| 3541065 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.57 | 50.0 | 3.03e-01 | 98.6% | 88.0% |
| 3841474 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.55 | 46.0 | 3.07e-01 | 94.2% | 56.6% |
| 3706766 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 46.0 | 3.08e-01 | 95.7% | 52.2% |
| 2323841 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 48.0 | 3.05e-01 | 98.6% | 89.6% |
| 3663339 | 331.4.1.7 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 | 0.55 | 43.0 | 3.35e-01 | 85.5% | 42.6% |
| 3984944 | 213.2.1.0 ↗ | a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy | 0.54 | 41.0 | 3.92e-01 | 84.1% | 78.8% |
| 3967853 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.54 | 44.0 | 3.75e-01 | 91.3% | 61.7% |
| 3937930 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 44.0 | 2.88e-01 | 100.0% | 51.7% |
| 3527535 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 2.97e-01 | 95.7% | 48.2% |
| 3800851 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 44.0 | 2.81e-01 | 100.0% | 26.4% |
| 3256904 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.50 | 39.0 | 3.28e-01 | 85.5% | 82.4% |
| 4213539 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.50 | 41.0 | 4.21e-01 | 100.0% | 98.5% |
D2
high
residues 85-148
D3
high
residues 152-230