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NC_070983.1__YP_010673227.1__PQC44_gp055__00055
Bact-VirNC_070983.1__YP_010673227.1__PQC44_gp055__00055
Identity
- Accession:
- NC_070983 ↗
- Kingdom:
- phage
Quality
61.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mtkvariviridae›
Suseptimavirus›
Escherichia_phage_IME267
TaxID: 2860374
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
rep: NC_052660.1__YP_009986652.1__JR325_gp173__00276__D78-150
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 49.0 | 3.35e-01 | 95.8% | 27.2% |
| 1crmA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.53 | 40.0 | 2.73e-01 | 80.6% | 75.8% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 45.0 | 3.42e-01 | 95.8% | 45.1% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 3.96e-01 | 80.6% | 79.5% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.70e-01 | 81.9% | 73.0% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.83e-01 | 93.1% | 42.4% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.03e-01 | 80.6% | 85.3% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.51 | 40.0 | 2.91e-01 | 87.5% | 38.5% |
| 5hx0A00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 42.0 | 2.72e-01 | 94.4% | 92.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503502 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.57 | 49.0 | 4.04e-01 | 95.8% | 56.9% |
| 3879179 | 2.1.1.169 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB1 | 0.56 | 41.0 | 3.13e-01 | 77.8% | 81.1% |
| 4937158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 33.0 | 3.61e-01 | 81.9% | 73.3% |
| 3593948 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 3.98e-01 | 81.9% | 83.5% |
| 3798355 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.53 | 44.0 | 3.65e-01 | 95.8% | 51.4% |
| 3249844 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.53 | 40.0 | 3.73e-01 | 80.6% | 75.6% |
| 3699819 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.52 | 41.0 | 3.69e-01 | 81.9% | 74.7% |
| 4961804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 39.0 | 3.92e-01 | 80.6% | 85.3% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.51 | 39.0 | 3.52e-01 | 81.9% | 79.0% |
| 3586008 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.88e-01 | 81.9% | 81.4% |
| 4466445 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.51 | 41.0 | 3.36e-01 | 95.8% | 58.7% |
| 4026958 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 26.0 | 2.91e-01 | 88.9% | 60.0% |
| 4246290 | 5.1.4.251 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › choice_anch_I | 0.50 | 43.0 | 2.64e-01 | 100.0% | 93.0% |
| 4029154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 39.0 | 3.24e-01 | 81.9% | 52.9% |
D2
high
residues 85-152