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NC_070987.1__YP_010673782.1__PQC48_gp105__00120

Bact-Vir

NC_070987.1__YP_010673782.1__PQC48_gp105__00120

Identity

Accession:
NC_070987 ↗
Kingdom:
phage

Quality

81.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mtkvariviridae› Kuravirus› Escherichia_phage_MN05

TaxID: 2711185

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-67
PDB
Domain cluster: rep: MK373770.1__QBQ76561.1__WFI101126_00134__00133__D12-71
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.67 47.0 4.38e-01 73.4% 88.6%
1wi0A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.66 47.0 4.01e-01 78.1% 61.1%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.64 56.0 4.50e-01 100.0% 88.1%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.64 44.0 4.17e-01 73.4% 85.2%
2arzA02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.63 43.0 3.88e-01 70.3% 87.5%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 56.0 5.08e-01 100.0% 90.7%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.63 46.0 4.10e-01 78.1% 72.8%
5mmiG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.63 44.0 4.07e-01 75.0% 82.1%
8cvmg01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.62 44.0 4.24e-01 75.0% 93.2%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.62 43.0 4.00e-01 75.0% 84.7%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 45.0 4.41e-01 78.1% 85.5%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 39.0 4.11e-01 95.3% 74.5%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 52.0 4.41e-01 100.0% 73.9%
4npsA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 37.0 3.86e-01 85.9% 65.5%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.61 43.0 3.14e-01 100.0% 27.2%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.60 43.0 3.94e-01 76.6% 87.1%
4nkbB02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 52.0 4.67e-01 100.0% 74.4%
1dq3A02 3.30.160.90 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 44.0 4.18e-01 81.2% 81.6%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.39e-01 87.5% 65.4%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 51.0 3.21e-01 100.0% 20.4%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 51.0 3.25e-01 100.0% 32.3%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.56 50.0 3.54e-01 100.0% 49.2%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 41.0 3.97e-01 90.6% 68.9%
3h09B02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.56 44.0 2.66e-01 89.1% 20.4%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 50.0 3.18e-01 100.0% 33.6%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 3.56e-01 93.8% 52.0%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 48.0 3.08e-01 100.0% 29.4%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.54 40.0 3.89e-01 93.8% 73.2%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.54 45.0 3.99e-01 98.4% 77.2%
1k0eB00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.54 44.0 2.77e-01 96.9% 77.8%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.04e-01 100.0% 42.3%
3c7xA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.53 46.0 3.23e-01 100.0% 31.1%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.94e-01 98.4% 27.4%
2byoA00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.53 44.0 3.24e-01 93.8% 66.1%
2ktsA01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.53 45.0 3.92e-01 98.4% 100.0%
2p6rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 3.10e-01 92.2% 73.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.52 39.0 3.82e-01 95.3% 74.6%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 2.89e-01 100.0% 21.9%
2bszA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.52 43.0 3.32e-01 98.4% 75.3%
3kifD00 2.20.25.650 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like 0.52 45.0 3.96e-01 98.4% 65.9%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.92e-01 89.1% 85.0%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.76e-01 92.2% 64.9%
1smpI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.76e-01 100.0% 88.0%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 29.0 2.97e-01 78.1% 54.8%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.51 41.0 3.70e-01 92.2% 79.6%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.50 38.0 3.84e-01 89.1% 81.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5054625 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.70 48.0 4.53e-01 73.4% 90.0%
3739717 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.68 47.0 4.35e-01 73.4% 88.2%
4242523 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.68 47.0 4.40e-01 73.4% 88.7%
4440185 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.67 47.0 4.29e-01 73.4% 87.1%
5071748 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.67 47.0 4.47e-01 73.4% 94.7%
3598177 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.67 46.0 4.28e-01 73.4% 84.7%
4945853 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.67 46.0 4.35e-01 73.4% 88.7%
4002646 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 49.0 3.21e-01 100.0% 19.2%
3602836 284.1.3.6 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF749 0.66 53.0 4.65e-01 90.6% 86.0%
5015408 4.8.1.50 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF749 0.66 53.0 4.81e-01 90.6% 95.6%
4558826 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.66 47.0 4.37e-01 75.0% 86.3%
3934175 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.66 59.0 4.77e-01 100.0% 66.7%
4036399 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.65 46.0 4.20e-01 73.4% 85.9%
2884367 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.65 46.0 4.22e-01 73.4% 83.3%
2897750 220.1.1.59 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH1_SSRP1-like 0.65 57.0 4.38e-01 100.0% 79.7%
4648433 4.8.1.26 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 0.65 53.0 4.87e-01 90.6% 98.8%
4098275 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.65 46.0 4.31e-01 75.0% 88.7%
4599942 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.65 45.0 4.24e-01 73.4% 83.7%
2855749 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.65 45.0 4.22e-01 73.4% 85.4%
4456820 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.64 44.0 4.19e-01 73.4% 87.5%
5005890 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 41.0 3.01e-01 98.4% 24.0%
5000858 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.64 44.0 4.18e-01 73.4% 87.5%
4383296 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.64 45.0 4.22e-01 75.0% 87.5%
3838921 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.64 46.0 4.27e-01 76.6% 88.7%
4088180 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.63 44.0 4.11e-01 75.0% 88.2%
4988664 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 51.0 4.90e-01 89.1% 96.0%
3506428 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.63 54.0 4.33e-01 100.0% 60.0%
5016434 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 5.19e-01 100.0% 97.3%
3451427 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.62 43.0 4.09e-01 75.0% 86.3%
3705577 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.61 52.0 4.07e-01 100.0% 56.0%
3743110 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.61 52.0 4.51e-01 100.0% 91.4%
5028466 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.61 49.0 4.04e-01 90.6% 96.7%
3225640 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.61 50.0 4.21e-01 100.0% 70.4%
1442686 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.60 43.0 3.94e-01 76.6% 87.1%
3890147 633.23.1.33 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin, GSG-1 0.59 54.0 3.67e-01 100.0% 60.5%
4950368 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 51.0 3.89e-01 100.0% 63.9%
4995140 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.58 47.0 3.66e-01 90.6% 84.1%
3257657 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 47.0 2.90e-01 92.2% 28.1%
426018 5.1.4.27 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.24e-01 100.0% 31.7%
4009281 219.1.1.65 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.57 42.0 3.59e-01 89.1% 48.6%
3910395 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.57 50.0 3.53e-01 100.0% 46.0%
5043213 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 48.0 3.45e-01 100.0% 86.5%
4100425 11.1.4.90 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF4550 0.55 46.0 3.68e-01 93.8% 60.8%
5066347 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 43.0 3.40e-01 90.6% 76.0%
3994190 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.55 48.0 3.04e-01 100.0% 60.0%
4302938 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.54 47.0 4.34e-01 100.0% 78.8%
3862483 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 28.0 3.45e-01 85.9% 77.5%
185632 5.1.4.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop 0.54 48.0 3.04e-01 100.0% 28.7%
4952106 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 3.42e-01 100.0% 65.0%
3253996 5.1.5.73 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.53 47.0 2.93e-01 98.4% 29.6%
3595430 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 47.0 3.33e-01 100.0% 65.5%
4317534 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 44.0 2.96e-01 100.0% 23.6%
3227356 633.23.1.4 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.52 45.0 3.21e-01 100.0% 58.6%
4956688 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.52 43.0 3.39e-01 92.2% 94.3%
5001903 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.95e-01 90.6% 77.1%
3440727 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 47.0 2.62e-01 100.0% 10.4%
3645846 5.1.4.383 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VPS11_N 0.52 47.0 2.91e-01 100.0% 23.8%
3199213 2002.1.1.83 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.52 38.0 2.47e-01 79.7% 42.5%
3527277 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.52 45.0 3.16e-01 95.3% 61.5%
4939990 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.51 46.0 2.98e-01 98.4% 60.0%
3494530 5.1.4.155 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 0.51 43.0 2.80e-01 100.0% 32.7%
3872745 319.1.1.5 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS 0.50 38.0 3.23e-01 90.6% 49.5%