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NC_070998.1__YP_010674832.1__PQC64_gp097__00166

Bact-Vir

NC_070998.1__YP_010674832.1__PQC64_gp097__00166

Identity

Accession:
NC_070998 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-52
PDB
D2 high residues 56-130
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18668.7 best Tail_spike_N 33.3 5.60e-08 68.0% 51.4%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oj5A02 2.10.10.80 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.82 64.0 6.60e-01 81.3% 93.0%
3h09A03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 46.0 4.33e-01 80.0% 77.3%
1wxrA03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 42.0 4.22e-01 80.0% 77.6%
4awyB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 38.0 2.65e-01 81.3% 91.9%
2k6pA00 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.51 35.0 3.38e-01 78.7% 64.3%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 34.0 3.09e-01 85.3% 47.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3921177 3761.1.1.0 beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.65 37.0 4.30e-01 77.3% 78.2%