←Back to structures

NC_070999.1__YP_010674972.1__PQC65_gp059__00059

Bact-Vir

NC_070999.1__YP_010674972.1__PQC65_gp059__00059

Identity

Accession:
NC_070999 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Ferozepurvirus› Aeromonas_phage_pAEv1810

TaxID: 2908744

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-129
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_122__YP_009481732__Pandoravirus_neocaledonia__2107708__D145-256
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.67 57.0 5.11e-01 89.8% 81.0%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.67 56.0 5.24e-01 88.2% 81.9%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.66 56.0 5.34e-01 89.0% 80.7%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.65 55.0 5.26e-01 89.8% 81.0%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 39.0 4.34e-01 80.3% 78.2%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 47.0 3.43e-01 79.5% 74.7%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.60 45.0 3.33e-01 78.0% 64.2%
3k25A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 45.0 3.42e-01 79.5% 71.9%
1t5rB00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.59 44.0 3.38e-01 77.2% 92.6%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.59 43.0 3.33e-01 75.6% 83.0%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.58 42.0 3.18e-01 74.8% 79.9%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.58 38.0 4.38e-01 81.9% 98.8%
7t4dA01 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.58 42.0 3.11e-01 74.0% 77.0%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 38.0 4.47e-01 79.5% 94.5%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.57 51.0 3.71e-01 98.4% 69.8%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 43.0 3.16e-01 80.3% 73.7%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 43.0 2.97e-01 79.5% 80.3%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 42.0 2.81e-01 79.5% 64.4%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 46.0 4.51e-01 89.0% 86.4%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 50.0 3.78e-01 99.2% 72.7%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 36.0 3.50e-01 77.2% 57.6%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 42.0 3.17e-01 78.7% 77.6%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.55 44.0 4.38e-01 86.6% 80.6%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 38.0 3.60e-01 89.8% 58.6%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.54 44.0 3.40e-01 89.0% 70.9%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 41.0 2.68e-01 81.1% 39.4%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 3.48e-01 92.9% 64.6%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 44.0 4.22e-01 98.4% 77.9%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 43.0 3.31e-01 86.6% 95.5%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.52 36.0 3.47e-01 89.0% 62.9%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 39.0 3.75e-01 85.8% 68.8%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 40.0 3.75e-01 81.9% 69.9%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 36.0 3.52e-01 86.6% 66.0%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 35.0 3.38e-01 84.3% 60.8%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4955671 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.73 44.0 5.41e-01 72.4% 95.0%
3228525 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.69 50.0 5.32e-01 93.7% 86.4%
3875809 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.67 57.0 5.19e-01 89.0% 72.1%
3794870 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.66 48.0 4.44e-01 74.8% 84.4%
4932771 11.1.1.1128 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27408 0.66 47.0 4.39e-01 71.7% 96.7%
3866573 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.66 48.0 3.62e-01 78.7% 32.5%
3534691 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.65 56.0 5.10e-01 90.6% 70.3%
3056279 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.65 54.0 4.95e-01 88.2% 73.0%
3230598 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.65 47.0 4.43e-01 74.8% 86.7%
3769924 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.63 42.0 4.22e-01 74.8% 66.2%
3173251 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.63 56.0 5.03e-01 95.3% 74.1%
3897847 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.63 47.0 4.26e-01 77.2% 84.6%
1413889 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.63 39.0 4.53e-01 80.3% 86.8%
3964265 5084.1.1.43 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter 0.62 42.0 4.08e-01 70.1% 100.0%
3309307 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 48.0 3.02e-01 81.1% 81.3%
3286883 2003.1.5.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.62 49.0 3.85e-01 81.9% 91.4%
5047426 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.62 37.0 3.95e-01 82.7% 67.0%
4666593 241.1.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.61 47.0 4.38e-01 80.3% 87.4%
4010371 295.1.1.45 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF30238 0.61 43.0 4.85e-01 71.7% 100.0%
3959029 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.61 42.0 4.02e-01 70.1% 89.7%
3242777 3459.1.1.2 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF4773 0.60 45.0 4.72e-01 80.3% 84.9%
3913260 5087.1.1.1 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.59 39.0 3.37e-01 88.2% 44.2%
4883064 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.59 44.0 3.53e-01 77.2% 87.2%
3308552 11.1.1.635 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_N_CWD1 0.59 42.0 4.25e-01 74.0% 85.4%
4009799 274.1.1.4 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.58 38.0 4.07e-01 81.1% 78.1%
3797033 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 46.0 4.35e-01 85.8% 77.4%
3970312 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.57 46.0 4.10e-01 85.0% 63.9%
3984883 274.1.1.4 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.57 38.0 4.00e-01 81.9% 74.8%
1866758 274.1.1.4 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.57 38.0 4.47e-01 79.5% 94.5%
4655950 274.1.1.4 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.57 38.0 3.99e-01 81.9% 73.9%
3972681 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.57 40.0 4.61e-01 81.1% 97.9%
5037445 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.57 44.0 3.46e-01 81.9% 94.6%
1146580 3308.1.1.2 ↗ beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme › CarG-like 0.56 47.0 4.45e-01 92.1% 100.0%
973647 11.13.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin 0.56 40.0 3.21e-01 74.0% 92.9%
3725129 241.1.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.56 39.0 3.65e-01 71.7% 85.8%
3408261 243.3.1.35 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 0.55 38.0 3.75e-01 70.9% 82.0%
3962078 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.55 43.0 3.89e-01 81.1% 86.1%
3671367 5.1.4.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel 0.55 45.0 3.25e-01 87.4% 79.7%
3811902 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 39.0 4.02e-01 76.4% 98.4%
4346250 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.54 43.0 4.14e-01 83.5% 86.4%
3976326 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.53 46.0 4.15e-01 96.1% 90.6%
3892200 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.53 39.0 3.21e-01 76.4% 78.7%
3711120 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.29e-01 90.6% 79.3%
3628180 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.53 47.0 4.42e-01 96.1% 92.3%
3921483 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.53 37.0 2.79e-01 87.4% 30.8%
4086554 11.10.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › Sina_TRAF 0.51 45.0 4.45e-01 94.5% 94.1%
5039963 12.3.1.12 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_transf_36 0.51 39.0 3.13e-01 79.5% 71.8%
3364063 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.51 43.0 4.24e-01 92.1% 89.3%
3672898 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.51 39.0 3.94e-01 93.7% 81.6%
3316054 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 46.0 3.17e-01 98.4% 96.2%
4008120 5.1.5.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.50 37.0 3.80e-01 85.0% 79.2%
5057921 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.50 41.0 3.34e-01 88.2% 95.6%