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NC_070999.1__YP_010675071.1__PQC65_gp158__00158

Bact-Vir

NC_070999.1__YP_010675071.1__PQC65_gp158__00158

Identity

Accession:
NC_070999 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Ferozepurvirus› Aeromonas_phage_pAEv1810

TaxID: 2908744

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-85
PDB
Domain cluster: rep: NC_042018.1__YP_009612849.1__FDI45_gp105__00105__D11-93
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.71 39.0 3.90e-01 81.0% 52.3%
3e8pA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 47.0 3.80e-01 70.2% 74.5%
3lw3B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 47.0 3.93e-01 70.2% 68.6%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 47.0 3.98e-01 71.4% 93.2%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.66 46.0 3.76e-01 72.6% 86.0%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 51.0 3.60e-01 83.3% 38.5%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 58.0 4.41e-01 100.0% 63.7%
1xf8A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 50.0 3.99e-01 83.3% 61.8%
2i79D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 44.0 3.55e-01 72.6% 65.9%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.61 55.0 4.35e-01 100.0% 79.4%
3kg6C00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.60 51.0 3.46e-01 89.3% 74.4%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.60 47.0 4.43e-01 89.3% 67.6%
2fe7B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 49.0 3.93e-01 89.3% 64.5%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 46.0 3.84e-01 82.1% 80.3%
7zqiA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.58 52.0 4.05e-01 98.8% 80.3%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 46.0 3.21e-01 86.9% 65.1%
4avaA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 48.0 3.85e-01 95.2% 59.6%
2arhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 51.0 4.18e-01 100.0% 53.8%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 37.0 3.95e-01 86.9% 76.1%
2bjiA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.56 40.0 3.46e-01 77.4% 95.8%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.56 39.0 3.47e-01 71.4% 92.4%
4ifdE00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.56 45.0 3.22e-01 89.3% 64.4%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 4.22e-01 100.0% 67.9%
2p3nA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.56 40.0 3.46e-01 76.2% 95.6%
3rr1A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 42.0 3.58e-01 81.0% 76.6%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 3.53e-01 89.3% 51.6%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 47.0 3.36e-01 94.0% 78.0%
7b3aA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 44.0 3.73e-01 90.5% 65.1%
4ri1C00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 48.0 3.83e-01 100.0% 65.7%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 45.0 3.07e-01 90.5% 45.5%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 44.0 2.98e-01 88.1% 34.1%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 49.0 3.35e-01 100.0% 38.7%
1cp9B02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.53 35.0 3.70e-01 76.2% 76.7%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.53 42.0 3.73e-01 88.1% 90.1%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.53 48.0 3.09e-01 100.0% 91.2%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 4.17e-01 95.2% 100.0%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.66e-01 83.3% 26.4%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 41.0 3.29e-01 91.7% 82.5%
4kc3A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 43.0 3.77e-01 100.0% 97.1%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.50 37.0 2.82e-01 81.0% 41.9%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3794101 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.71 59.0 4.41e-01 91.7% 91.4%
3782338 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 44.0 4.30e-01 82.1% 65.6%
3931156 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 46.0 4.92e-01 88.1% 91.4%
3728854 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 44.0 4.87e-01 88.1% 93.8%
3214097 330.1.1.24 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.62 47.0 4.69e-01 79.8% 96.5%
5072132 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.62 47.0 4.80e-01 97.6% 83.7%
3933100 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 41.0 4.43e-01 85.7% 81.4%
2516764 71.1.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.61 56.0 4.30e-01 100.0% 73.9%
4345013 4998.1.1.1 ↗ beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.61 56.0 4.50e-01 100.0% 73.1%
3788141 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 45.0 4.74e-01 84.5% 86.7%
3846927 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 47.0 4.50e-01 81.0% 77.9%
3703246 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.61 48.0 4.41e-01 84.5% 84.5%
3262671 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.61 51.0 2.95e-01 90.5% 28.6%
3596915 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 54.0 3.27e-01 100.0% 34.7%
3520492 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 48.0 3.87e-01 85.7% 56.2%
5060047 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.60 43.0 3.53e-01 75.0% 92.9%
3370322 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.59 45.0 4.43e-01 84.5% 74.4%
3678841 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 43.0 4.31e-01 85.7% 76.5%
5078150 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.58 50.0 4.16e-01 94.0% 59.3%
4972468 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.58 45.0 3.62e-01 84.5% 56.5%
3782340 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 45.0 4.38e-01 88.1% 74.7%
3514660 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 45.0 4.44e-01 84.5% 95.6%
3451281 71.1.1.12 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 0.58 45.0 3.16e-01 86.9% 55.7%
5018904 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.57 46.0 3.50e-01 100.0% 37.4%
4977522 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.57 50.0 4.07e-01 96.4% 65.2%
3603162 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.57 47.0 4.64e-01 90.5% 88.9%
4929567 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.57 39.0 3.29e-01 94.0% 41.4%
4101946 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.57 49.0 4.02e-01 100.0% 60.6%
5046191 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.56 42.0 3.50e-01 82.1% 92.5%
3582298 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 43.0 2.70e-01 83.3% 41.4%
3408937 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 42.0 4.30e-01 86.9% 83.7%
3520092 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.56 41.0 4.24e-01 100.0% 82.5%
3217918 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.55 46.0 3.12e-01 95.2% 61.1%
5022814 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.55 43.0 4.56e-01 88.1% 96.0%
4017127 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 38.0 2.66e-01 100.0% 22.1%
5036897 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 45.0 3.79e-01 91.7% 99.3%
3925738 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 42.0 3.92e-01 91.7% 64.5%
3863169 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.54 48.0 3.80e-01 100.0% 82.9%
3944955 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.54 45.0 3.80e-01 91.7% 66.4%
3648015 9.1.1.21 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind 0.54 46.0 3.76e-01 100.0% 75.9%
3319893 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 43.0 4.08e-01 88.1% 79.0%
5083058 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.53 43.0 4.41e-01 89.3% 98.8%
3690503 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.52 47.0 4.30e-01 100.0% 93.6%
3393981 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 41.0 2.72e-01 88.1% 34.2%
3965906 5.1.5.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ 0.51 46.0 2.75e-01 100.0% 32.9%
3702942 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 35.0 2.52e-01 83.3% 22.6%