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NC_070999.1__YP_010675086.1__PQC65_gp173__00173
Bact-VirNC_070999.1__YP_010675086.1__PQC65_gp173__00173
Identity
- Accession:
- NC_070999 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Ferozepurvirus›
Aeromonas_phage_pAEv1810
TaxID: 2908744
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-100
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.71 | 51.0 | 5.32e-01 | 100.0% | 81.4% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 44.0 | 5.11e-01 | 77.4% | 94.0% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 34.0 | 2.60e-01 | 89.2% | 22.0% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 55.0 | 4.87e-01 | 98.9% | 81.5% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 56.0 | 4.81e-01 | 98.9% | 81.2% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.62 | 50.0 | 5.21e-01 | 91.4% | 94.2% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.60 | 44.0 | 4.63e-01 | 78.5% | 83.3% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 53.0 | 4.51e-01 | 98.9% | 77.6% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.60 | 49.0 | 4.98e-01 | 92.5% | 98.9% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.58 | 46.0 | 3.20e-01 | 87.1% | 70.2% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 48.0 | 4.72e-01 | 92.5% | 83.2% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.57 | 46.0 | 3.83e-01 | 84.9% | 75.2% |
| 1yuzB01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 50.0 | 4.42e-01 | 98.9% | 83.3% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 39.0 | 4.02e-01 | 77.4% | 75.9% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.56 | 38.0 | 3.52e-01 | 71.0% | 62.2% |
| 1g8jA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 49.0 | 3.61e-01 | 98.9% | 76.3% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.54 | 47.0 | 4.33e-01 | 98.9% | 74.2% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.53 | 46.0 | 3.98e-01 | 100.0% | 78.6% |
| 6ln0A02 | 1.10.8.1190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain | 0.52 | 35.0 | 3.39e-01 | 91.4% | 60.6% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.52 | 38.0 | 3.21e-01 | 91.4% | 44.8% |
| 6f7bA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 42.0 | 3.01e-01 | 92.5% | 70.9% |
| 3f6tA02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.51 | 37.0 | 3.22e-01 | 79.6% | 48.3% |
| 2vdwG00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 2.78e-01 | 81.7% | 90.9% |
| 1l8nA03 | 3.90.1330.10 | Alpha Beta › Alpha-Beta Complex › Alpha-d-glucuronidase, C-terminal Domain › Alpha-glucuronidase, C-terminal domain | 0.51 | 45.0 | 3.49e-01 | 98.9% | 73.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395965 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.83 | 43.0 | 5.66e-01 | 94.6% | 89.1% |
| 3652633 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.66 | 55.0 | 4.91e-01 | 90.3% | 79.2% |
| 3724595 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.65 | 40.0 | 4.73e-01 | 84.9% | 95.0% |
| 3608231 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.60 | 52.0 | 3.39e-01 | 100.0% | 86.5% |
| 3688231 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.60 | 44.0 | 3.69e-01 | 78.5% | 49.1% |
| 3597632 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 42.0 | 4.03e-01 | 74.2% | 65.5% |
| 3250091 | 3948.1.1.0 ↗ | alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain | 0.60 | 46.0 | 3.94e-01 | 87.1% | 51.3% |
| 3601023 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.58 | 46.0 | 3.61e-01 | 87.1% | 100.0% |
| 4945339 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 41.0 | 3.38e-01 | 73.1% | 76.5% |
| 3269624 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.58 | 47.0 | 4.69e-01 | 87.1% | 95.8% |
| 3549954 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.57 | 46.0 | 3.29e-01 | 90.3% | 30.7% |
| 4938470 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 38.0 | 3.86e-01 | 79.6% | 70.0% |
| 3229713 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.57 | 46.0 | 4.00e-01 | 90.3% | 94.0% |
| 3346727 | 605.1.1.224 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Myb_DNA-bind_3 | 0.56 | 31.0 | 3.45e-01 | 78.5% | 70.0% |
| 4123281 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 44.0 | 3.78e-01 | 97.8% | 58.6% |
| 3520491 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.52 | 38.0 | 2.79e-01 | 78.5% | 57.0% |
| 3786350 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.50 | 36.0 | 3.53e-01 | 82.8% | 70.0% |