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NC_071004.1__YP_010675483.1__PQD13_gp54__00054

Bact-Vir

Identity

Accession:: NC_071004 ↗
Kingdom:: phage

Quality

73.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clawzvirus› Gordonia_phage_Clawz

TaxID: 2743910

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-174

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23781.2 best	Phage_TAC_16	55.8	5.80e-15	100.0%	72.6%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1hx8A01	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.60	37.0	3.37e-01	94.0%	44.9%
3piwA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.59	45.0	3.73e-01	83.3%	98.1%
1lfkA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.57	47.0	3.17e-01	96.4%	38.1%
1cmjA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.56	48.0	3.11e-01	96.4%	37.1%
3ppbA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.56	45.0	3.59e-01	91.7%	46.3%
3behB01	1.20.120.540	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels	0.52	40.0	3.68e-01	85.7%	79.5%
2xguB00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.52	41.0	3.47e-01	83.3%	95.5%
3r2qA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.51	39.0	3.54e-01	82.1%	87.6%
4adnA01	1.20.1280.250	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.50	42.0	4.22e-01	100.0%	89.4%
3nfqB02	1.20.930.10	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.50	39.0	3.61e-01	83.3%	75.9%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3398490	101.1.1.112 ↗	alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg	0.61	40.0	4.49e-01	100.0%	86.2%
3975686	6050.1.1.2 ↗	a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_2	0.59	52.0	4.85e-01	98.8%	98.1%
4050316	109.4.1.1259 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2	0.57	40.0	2.81e-01	72.6%	26.7%
3865185	611.3.1.1 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26	0.54	41.0	3.99e-01	81.0%	81.1%
3471670	611.3.1.1 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26	0.53	40.0	4.21e-01	78.6%	96.0%
3258644	189.1.1.2 ↗	alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP	0.53	44.0	3.59e-01	96.4%	90.6%
3164109	101.1.1.74 ↗	alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_3	0.52	38.0	4.07e-01	77.4%	98.6%
3482665	611.3.1.0 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.52	39.0	3.92e-01	78.6%	84.7%