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NC_071007.1__YP_010675783.1__PQD16_gp228__00010
Bact-VirNC_071007.1__YP_010675783.1__PQD16_gp228__00010
Identity
- Accession:
- NC_071007 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Taxonomy
TaxID: 2924888
Cluster
View cluster (69 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-14_77-210
Domain cluster:
rep: IMGVR_UViG_3300024252_001273-3300024252-Ga0233435_100111037__D8-16_75-187
D2
high
residues 18-73
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ijqA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.65 | 48.0 | 3.50e-01 | 78.6% | 87.6% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.64 | 37.0 | 3.35e-01 | 82.1% | 38.3% |
| 1dysA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.61 | 50.0 | 3.07e-01 | 91.1% | 91.9% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.60 | 50.0 | 3.61e-01 | 100.0% | 45.1% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.58 | 37.0 | 3.44e-01 | 80.4% | 49.3% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 44.0 | 3.51e-01 | 100.0% | 75.6% |
| 3mvuA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.53 | 42.0 | 2.97e-01 | 100.0% | 83.5% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 42.0 | 3.50e-01 | 98.2% | 56.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3338586 | 632.1.1.12 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › GAUT_1 | 0.74 | 59.0 | 5.00e-01 | 85.7% | 78.9% |
| 4993688 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.72 | 58.0 | 4.87e-01 | 89.3% | 74.7% |
| 4051482 | 11.1.1.154 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S | 0.70 | 58.0 | 4.02e-01 | 92.9% | 32.1% |
| 3595970 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.66 | 52.0 | 3.58e-01 | 82.1% | 48.1% |
| 3236224 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.60 | 49.0 | 4.02e-01 | 96.4% | 78.3% |
| 3603460 | 109.4.1.1877 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, ANAPC3, TPR_8, TPR_16 | 0.59 | 45.0 | 2.84e-01 | 85.7% | 24.9% |
| 5051912 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.54 | 37.0 | 3.65e-01 | 76.8% | 81.5% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.53 | 42.0 | 2.96e-01 | 94.6% | 59.1% |
| 3285567 | 5069.1.1.17 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF6529 | 0.51 | 45.0 | 3.12e-01 | 98.2% | 66.1% |