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NC_071012.1__YP_010676429.1__PQD68_gp073__00073
Bact-VirNC_071012.1__YP_010676429.1__PQD68_gp073__00073
Identity
- Accession:
- NC_071012 ↗
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Taxonomy
TaxID: 2849244
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 142-246
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00101__D224-326
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06725.18 best | 3D | 25.0 | 2.40e-05 | 59.1% | 93.1% |
D2
medium
residues 11-120
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 57.0 | 4.27e-01 | 86.4% | 62.6% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 49.0 | 4.70e-01 | 75.5% | 94.3% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 52.0 | 4.02e-01 | 82.7% | 41.7% |
| 4flaC00 | 6.10.250.2560 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 44.0 | 4.22e-01 | 75.5% | 65.4% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.52 | 36.0 | 2.36e-01 | 70.9% | 61.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3249317 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.92 | 64.0 | 5.47e-01 | 70.9% | 48.8% |
| 4003362 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.83 | 68.0 | 5.60e-01 | 85.5% | 99.5% |
| 3270864 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.72 | 58.0 | 4.41e-01 | 87.3% | 37.6% |
| 3990428 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.71 | 56.0 | 4.36e-01 | 84.5% | 47.7% |
| 3936516 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.70 | 56.0 | 4.83e-01 | 83.6% | 92.1% |
| 3798533 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.66 | 52.0 | 4.06e-01 | 84.5% | 40.4% |
| 3168735 | 4177.1.1.9 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Snx8_BAR_dom | 0.62 | 50.0 | 3.76e-01 | 85.5% | 37.4% |
| 4034260 | 605.1.1.12 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF4870 | 0.61 | 40.0 | 3.94e-01 | 73.6% | 62.5% |