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NC_071013.1__YP_010676504.1__PQD69_gp038__00038

Bact-Vir

NC_071013.1__YP_010676504.1__PQD69_gp038__00038

Identity

Accession:
NC_071013 ↗
Kingdom:
phage

Quality

83.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b0fA00 1.20.5.3730 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.81 67.0 6.12e-01 88.9% 78.9%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.76 64.0 4.70e-01 91.1% 39.6%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.68 54.0 4.76e-01 93.3% 59.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3276035 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 61.0 3.50e-01 100.0% 26.0%
4952173 109.4.1.207 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.67 57.0 4.42e-01 95.6% 69.4%
5073264 7577.1.1.4 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC 0.60 51.0 2.94e-01 93.3% 13.3%