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NC_071015.1__YP_010676940.1__PQD71_gp198__00235

Bact-Vir

Identity

Accession:: NC_071015 ↗
Kingdom:: phage

Quality

84.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Branisovskavirus› Kosakonia_phage_Kc263

TaxID: 2863194

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-79

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ke2A00	6.10.140.1860	Special › Helix non-globular › Helix Hairpins ›	0.90	84.0	6.13e-01	100.0%	44.9%
3nyjA00	1.20.120.770	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain	0.90	84.0	6.25e-01	100.0%	45.9%
2r9iA00	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.75	61.0	6.44e-01	87.3%	97.2%
3lphC00	6.10.140.630	Special › Helix non-globular › Helix Hairpins ›	0.73	47.0	5.37e-01	72.2%	89.7%
1m5iA00	1.10.287.450	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.72	52.0	4.74e-01	75.9%	100.0%
1vcsA00	1.20.58.400	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins	0.70	49.0	4.51e-01	74.7%	56.9%
1vh6A01	6.10.140.1940	Special › Helix non-globular › Helix Hairpins ›	0.68	47.0	4.33e-01	73.4%	57.7%
3sjqC00	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.65	55.0	5.56e-01	100.0%	95.0%
3agtA00	1.20.120.50	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like	0.63	43.0	3.72e-01	73.4%	42.9%
4q5rA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.61	42.0	3.79e-01	72.2%	54.5%
3l8rA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.58	41.0	3.78e-01	73.4%	61.8%
2b5dX01	3.20.110.10	Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain	0.51	45.0	2.80e-01	93.7%	63.1%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3913300	3755.3.1.303 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th	0.95	67.0	5.18e-01	72.2%	38.0%
3781767	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.85	79.0	4.84e-01	100.0%	51.9%
3404270	377.1.1.0 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like	0.84	76.0	6.40e-01	100.0%	69.2%
3529043	3922.1.1.179 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › bMERB_dom	0.77	71.0	5.34e-01	100.0%	50.0%
3460130	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.76	49.0	4.88e-01	77.2%	63.7%
3409567	3755.3.1.324 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725	0.76	70.0	5.42e-01	100.0%	51.5%
None	—		0.76	69.0	5.16e-01	100.0%	78.9%
4018370	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.68	62.0	5.22e-01	100.0%	60.8%

D2 medium residues 80-139

PDB

Domain cluster: representative