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NC_071018.1__YP_010677146.1__PQD74_gp040__00040
Bact-VirNC_071018.1__YP_010677146.1__PQD74_gp040__00040
Identity
- Accession:
- NC_071018 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 2859658
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 35.0 | 2.64e-01 | 88.0% | 19.8% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 40.0 | 3.22e-01 | 94.0% | 55.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3739165 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.63 | 44.0 | 2.87e-01 | 74.0% | 92.9% |
| 4934996 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.61 | 35.0 | 2.82e-01 | 94.0% | 27.4% |
| 4937535 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.60 | 51.0 | 3.55e-01 | 100.0% | 61.1% |
| 3212212 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.54 | 45.0 | 2.74e-01 | 96.0% | 71.3% |
| 3937161 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 39.0 | 3.37e-01 | 84.0% | 46.7% |
| 3939681 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.52 | 40.0 | 2.62e-01 | 100.0% | 50.3% |
| 3564496 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 41.0 | 3.09e-01 | 98.0% | 80.0% |
| 3430484 | 221.4.1.6 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX-like | 0.51 | 38.0 | 2.80e-01 | 96.0% | 26.5% |
D2
medium
residues 51-125