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NC_071036.1__YP_010678523.1__PQE62_gp64__00064

Bact-Vir

NC_071036.1__YP_010678523.1__PQE62_gp64__00064

Identity

Accession:
NC_071036 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Axeltriavirus› Stenotrophomonas_phage_vB_SmaS-AXL_3

TaxID: 2740427

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 385-478_507-592
PDB
Domain cluster: rep: hypothetical_protein_CHBEV_328__YP_008004398__Choristoneura_biennis_entomopoxvirus__10288__D127-290
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 62.0 5.93e-01 88.3% 87.6%
1fnnA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 50.0 5.08e-01 70.6% 100.0%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 49.0 4.75e-01 70.6% 92.5%
1svmA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 48.0 5.26e-01 70.6% 100.0%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 46.0 4.88e-01 70.0% 88.9%
3t15A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 45.0 4.87e-01 70.0% 93.5%
2vl7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 45.0 4.65e-01 70.6% 100.0%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 45.0 4.23e-01 71.7% 91.1%
3vkgA07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 3.72e-01 77.2% 48.1%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 45.0 4.47e-01 73.9% 80.1%
2wojC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 3.79e-01 81.1% 95.1%
1g19A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 48.0 4.45e-01 95.0% 87.1%
1htwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 4.53e-01 88.3% 94.9%
1adoA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 38.0 3.02e-01 71.7% 90.1%
2ykgA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 31.0 3.79e-01 90.0% 92.7%
2ekdA00 3.40.50.11570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 0.52 43.0 4.13e-01 87.2% 97.0%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 4.11e-01 77.8% 88.2%
3etnB00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 41.0 4.00e-01 85.0% 82.3%
3rhfD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.71e-01 90.0% 91.8%
5ywwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 47.0 4.66e-01 99.4% 97.9%
6s3eB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 4.30e-01 91.7% 99.5%
2ps2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.51 36.0 3.33e-01 73.3% 78.6%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.50 41.0 4.03e-01 86.1% 84.3%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 3.94e-01 88.3% 97.2%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4959586 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.81 77.0 6.49e-01 100.0% 87.8%
4973289 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 75.0 6.45e-01 97.8% 80.8%
3945876 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.80 74.0 6.42e-01 98.9% 78.1%
4444758 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.72 50.0 4.90e-01 70.6% 87.7%
4998715 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 50.0 5.37e-01 70.6% 98.1%
3740404 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 49.0 5.24e-01 70.6% 100.0%
4989618 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 49.0 4.69e-01 70.6% 77.6%
4030700 2004.1.1.292 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase 0.70 51.0 5.02e-01 73.9% 99.5%
4646556 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 48.0 4.72e-01 70.0% 88.2%
3352161 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 48.0 4.40e-01 70.0% 77.0%
3673511 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 49.0 4.69e-01 71.7% 88.3%
4023471 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 49.0 4.97e-01 71.7% 89.1%
3784919 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 51.0 4.68e-01 75.0% 79.1%
3952423 2004.1.1.339 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3631 0.69 62.0 5.43e-01 96.7% 92.1%
3866980 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 47.0 4.84e-01 70.0% 89.7%
4015313 2004.1.1.432 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.68 47.0 4.30e-01 70.0% 90.6%
3618060 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.68 47.0 4.95e-01 70.6% 95.2%
3867032 2004.1.1.98 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 0.68 50.0 4.28e-01 76.1% 70.2%
4975944 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 49.0 4.21e-01 75.6% 76.1%
3237199 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.67 46.0 4.96e-01 70.0% 98.7%
5062315 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.66 49.0 4.54e-01 75.0% 94.1%
2649126 2004.1.1.190 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16,ORC5_lid 0.66 49.0 4.25e-01 76.1% 65.8%
None — 0.66 48.0 3.96e-01 74.4% 76.9%
None — 0.66 49.0 4.24e-01 76.1% 62.9%
3728270 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.66 46.0 4.85e-01 70.0% 91.9%
5062172 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.66 49.0 4.50e-01 76.1% 75.7%
3688286 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 47.0 4.87e-01 71.7% 90.3%
3994511 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 45.0 4.59e-01 70.0% 82.9%
5058728 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 47.0 4.35e-01 75.6% 80.0%
3964755 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 44.0 4.81e-01 71.7% 88.0%
3836355 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.62 47.0 4.21e-01 77.2% 72.5%
3538386 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 44.0 3.82e-01 75.6% 58.9%
5066569 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.58 53.0 3.72e-01 97.2% 75.0%
4542391 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 50.0 4.48e-01 96.7% 70.8%
5034481 2004.1.1.194 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 0.53 38.0 3.59e-01 73.3% 95.4%
4014140 2007.6.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.52 42.0 3.95e-01 85.6% 78.2%
3693420 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.52 42.0 3.88e-01 86.7% 75.7%
1114698 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.50 41.0 4.02e-01 86.1% 83.9%
D2 high residues 595-698
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 46.0 4.60e-01 81.7% 66.7%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 4.72e-01 81.7% 68.9%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 42.0 4.78e-01 76.0% 85.1%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 42.0 4.33e-01 79.8% 66.0%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 40.0 4.75e-01 95.2% 91.2%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 41.0 4.24e-01 79.8% 65.3%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 41.0 5.00e-01 80.8% 100.0%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 38.0 4.67e-01 95.2% 93.7%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 5.01e-01 79.8% 91.3%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 40.0 4.46e-01 80.8% 80.0%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 43.0 4.91e-01 80.8% 95.9%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.62e-01 79.8% 76.0%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.26e-01 79.8% 65.7%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 3.96e-01 80.8% 58.0%
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 5.19e-01 85.6% 92.3%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.63 44.0 4.91e-01 80.8% 92.6%
1aoyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 38.0 4.30e-01 80.8% 79.5%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.35e-01 80.8% 69.5%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.18e-01 81.7% 64.3%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 39.0 4.33e-01 81.7% 80.5%
3euhC02 1.10.10.2260 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain 0.62 47.0 4.68e-01 79.8% 86.1%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.74e-01 80.8% 90.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.26e-01 81.7% 78.3%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.81e-01 79.8% 95.3%
4f0zB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 36.0 3.17e-01 71.2% 40.0%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 38.0 3.96e-01 81.7% 69.4%
2mtfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.17e-01 80.8% 70.2%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.58 41.0 3.82e-01 80.8% 56.5%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.59e-01 81.7% 50.0%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.43e-01 78.8% 85.0%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.57 41.0 4.54e-01 84.6% 98.8%
1if1B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 4.28e-01 81.7% 98.1%
2ph7A01 1.10.3400.10 Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like 0.55 44.0 4.23e-01 100.0% 75.0%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.54 37.0 4.05e-01 80.8% 88.2%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.63e-01 81.7% 59.8%
2g1pA02 1.10.1020.10 Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 0.53 33.0 3.35e-01 81.7% 62.0%
6s10A01 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.50 37.0 3.78e-01 99.0% 80.4%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4017273 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 35.0 4.60e-01 76.9% 85.5%
4031678 101.1.2.20 ↗ alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.73 41.0 4.99e-01 95.2% 87.7%
3975657 101.1.2.20 ↗ alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.71 39.0 4.58e-01 95.2% 76.0%
4997662 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 46.0 4.51e-01 79.8% 61.8%
3667030 101.1.2.466 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.70 45.0 5.05e-01 80.8% 85.9%
3677397 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 45.0 2.82e-01 80.8% 13.3%
3700540 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 5.40e-01 77.9% 92.5%
3392391 101.1.2.397 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.70 44.0 4.98e-01 79.8% 86.7%
5000704 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 45.0 4.86e-01 79.8% 77.8%
3432388 109.4.1.43 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP 0.68 46.0 4.07e-01 82.7% 48.0%
2494143 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 47.0 4.59e-01 81.7% 65.8%
5053372 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.68 42.0 3.85e-01 79.8% 46.4%
4995581 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 46.0 4.74e-01 81.7% 73.0%
2056399 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.67 41.0 4.72e-01 75.0% 84.2%
4979487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 45.0 4.06e-01 81.7% 50.7%
3891461 101.1.2.606 ↗ alpha arrays › HTH › HTH › winged helix domain › RPC5_C 0.67 41.0 4.47e-01 82.7% 74.1%
5046890 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 4.18e-01 81.7% 52.9%
5046131 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 4.68e-01 81.7% 73.0%
5058268 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.66 44.0 4.29e-01 78.8% 60.9%
3225058 101.1.2.566 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.66 46.0 3.24e-01 80.8% 23.1%
3781009 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 3.44e-01 83.7% 28.0%
5003436 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 39.0 4.80e-01 77.9% 100.0%
3275982 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.65 48.0 3.82e-01 82.7% 38.5%
5077022 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 46.0 4.69e-01 81.7% 75.0%
5036586 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 43.0 4.68e-01 79.8% 82.4%
3305861 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 43.0 3.94e-01 80.8% 51.9%
3467284 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.65 46.0 4.63e-01 81.7% 71.3%
3990493 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 5.01e-01 82.7% 87.8%
4944051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 3.77e-01 81.7% 42.9%
3744259 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.65 46.0 4.28e-01 81.7% 59.2%
3928777 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.65 45.0 4.46e-01 80.8% 68.2%
3841412 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.64 44.0 4.32e-01 79.8% 64.3%
5073929 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 46.0 4.55e-01 81.7% 70.9%
3744213 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.64 44.0 3.98e-01 79.8% 52.1%
3786023 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.64 45.0 3.46e-01 80.8% 32.1%
5031473 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 43.0 4.37e-01 80.8% 69.5%
4942265 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 42.0 4.61e-01 82.7% 83.5%
3927517 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 46.0 4.69e-01 79.8% 79.0%
4478358 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.93e-01 82.7% 100.0%
4017175 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.63 48.0 3.67e-01 80.8% 40.8%
3499387 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.63 43.0 4.29e-01 80.8% 67.3%
3889562 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.81e-01 82.7% 97.3%
3680635 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.62 44.0 4.45e-01 80.8% 72.4%
5047500 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.62 46.0 3.68e-01 80.8% 38.6%
5000571 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 42.0 4.63e-01 79.8% 88.7%
3550392 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 3.48e-01 80.8% 38.9%
5071269 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 43.0 3.45e-01 80.8% 35.7%
5064866 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.25e-01 81.7% 67.3%
4938741 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.62 41.0 3.77e-01 80.8% 50.7%
3283103 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.42e-01 82.7% 73.3%
3272642 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.57e-01 81.7% 81.1%
3784677 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.61 47.0 3.66e-01 80.8% 38.2%
3319155 101.1.4.12 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.61 47.0 3.43e-01 82.7% 30.4%
3383404 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.61 44.0 4.40e-01 81.7% 74.0%
3568884 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.61 48.0 4.08e-01 83.7% 55.2%
3481449 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.61 46.0 3.82e-01 80.8% 46.1%
3829946 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.61 45.0 3.93e-01 78.8% 52.5%
3830447 101.1.2.397 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.61 43.0 4.79e-01 82.7% 96.2%
3831895 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.61 47.0 3.45e-01 82.7% 31.3%
3731219 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.61 46.0 4.32e-01 79.8% 73.6%
3168448 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.60 42.0 3.93e-01 80.8% 58.1%
4969221 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.60 42.0 3.02e-01 80.8% 24.2%
3638163 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.60 42.0 4.23e-01 81.7% 71.0%
3586609 101.1.2.278 ↗ alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.60 42.0 4.03e-01 81.7% 63.0%
3205132 101.1.2.533 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_CYT4 0.60 41.0 4.34e-01 79.8% 77.9%
3735293 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.60 46.0 3.47e-01 82.7% 33.8%
3416278 101.1.2.12 ↗ alpha arrays › HTH › HTH › winged helix domain › DEP 0.60 45.0 4.75e-01 80.8% 93.7%
5001098 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 4.36e-01 80.8% 83.3%
5045911 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 44.0 4.40e-01 80.8% 78.1%
3739985 101.1.2.98 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1 0.58 43.0 3.80e-01 82.7% 52.3%
3552400 101.1.2.566 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.58 45.0 3.29e-01 82.7% 31.7%
3257174 101.1.2.148 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.58 44.0 4.09e-01 79.8% 76.2%
3717122 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 51.0 4.88e-01 100.0% 99.2%
3187002 101.1.2.635 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C, PF26121 0.57 47.0 3.44e-01 92.3% 47.5%
3423767 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.57 37.0 3.55e-01 77.9% 56.0%
4012389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 36.0 3.28e-01 80.8% 46.4%
5045584 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 4.37e-01 81.7% 81.9%
5014943 101.1.2.925 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7344 0.56 38.0 3.41e-01 78.8% 49.7%
143797 101.1.2.149 ↗ alpha arrays › HTH › HTH › winged helix domain › Costars 0.54 37.0 4.10e-01 80.8% 92.6%
3632862 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 43.0 4.25e-01 98.1% 80.9%
3414623 101.1.2.566 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.53 46.0 3.29e-01 93.3% 72.5%
5000260 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 3.88e-01 95.2% 86.9%
D3 medium residues 22-139
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cs2A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.52 33.0 3.13e-01 79.7% 51.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4428983 5.1.4.321 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.54 42.0 2.85e-01 83.1% 92.3%
D4 medium residues 140-268
PDB
Domain cluster: rep: IMGVR_UViG_3300042256_000037-3300042256-Ga0451646_00357_7329_9968__D263-392
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12965.14 best DUF3854 56.4 4.10e-15 88.4% 88.5%
D5 medium residues 269-347
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.67 33.0 3.54e-01 91.1% 52.2%
5i9eA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.59 39.0 3.52e-01 97.5% 46.9%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.72e-01 100.0% 53.8%
5adxJ01 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.57 38.0 3.71e-01 96.2% 59.1%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 36.0 3.21e-01 97.5% 44.5%
1bryY02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.54 35.0 3.51e-01 93.7% 62.4%
3mvgB02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.51 36.0 3.50e-01 96.2% 66.7%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.50 27.0 3.21e-01 81.0% 80.0%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.50 37.0 2.58e-01 79.7% 90.9%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.50 38.0 3.04e-01 82.3% 89.7%
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.50 27.0 2.84e-01 79.7% 56.3%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3197950 256.1.1.0 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.62 26.0 3.34e-01 83.5% 66.7%
5077402 2007.15.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.58 34.0 2.61e-01 92.4% 24.9%
5082315 101.1.2.16 ↗ alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.54 43.0 3.77e-01 91.1% 90.8%
3835500 192.15.1.163 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › PF27048 0.53 29.0 3.24e-01 82.3% 68.3%
3290556 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 39.0 2.96e-01 82.3% 96.6%
4033792 101.1.2.214 ↗ alpha arrays › HTH › HTH › winged helix domain › DnaD_N 0.52 40.0 3.39e-01 100.0% 49.6%
5062356 2492.1.1.5 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas 0.51 37.0 2.78e-01 78.5% 93.0%
3252037 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.51 39.0 2.99e-01 81.0% 64.9%
3627409 6166.1.1.1 ↗ alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.51 38.0 2.90e-01 81.0% 68.0%
3687261 3409.1.1.3 ↗ a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 0.51 42.0 3.17e-01 93.7% 94.8%
4305637 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 45.0 3.85e-01 100.0% 84.6%
3727253 3922.1.1.250 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › ATG14 0.51 40.0 2.64e-01 88.6% 52.3%
3484153 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.50 41.0 2.50e-01 98.7% 38.5%
4441043 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.50 43.0 3.49e-01 98.7% 52.5%