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NC_071039.1__YP_010678915.1__PQE65_gp299__00182

Bact-Vir

NC_071039.1__YP_010678915.1__PQE65_gp299__00182

Identity

Accession:
NC_071039 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-93
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.62 45.0 4.02e-01 76.7% 68.9%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 39.0 4.16e-01 90.0% 77.5%
1a2tA00 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 47.0 4.09e-01 91.1% 95.6%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 33.0 2.95e-01 100.0% 41.8%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.54 35.0 3.42e-01 100.0% 59.8%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.58e-01 82.2% 85.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3300848 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.86 39.0 3.68e-01 96.7% 38.8%
4033114 2.6.1.1 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.59 50.0 4.36e-01 91.1% 93.8%
2579126 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.53 44.0 3.74e-01 88.9% 72.2%
5028505 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.53 43.0 3.71e-01 87.8% 72.9%