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NC_071039.1__YP_010678915.1__PQE65_gp299__00182
Bact-VirNC_071039.1__YP_010678915.1__PQE65_gp299__00182
Identity
- Accession:
- NC_071039 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Arenbergviridae›
Wroclawvirus›
Pseudomonas_phage_vB_PaeM_PA5oct
TaxID: 2163605
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-93
Domain cluster:
rep: BML_08182015_1_5m_scaffold_5_prodigal-single.1__X__X__00105__D25-124
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fouA02 | 2.40.500.10 | Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) | 0.62 | 45.0 | 4.02e-01 | 76.7% | 68.9% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 39.0 | 4.16e-01 | 90.0% | 77.5% |
| 1a2tA00 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 47.0 | 4.09e-01 | 91.1% | 95.6% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 33.0 | 2.95e-01 | 100.0% | 41.8% |
| 4whiA00 | 2.40.128.600 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 35.0 | 3.42e-01 | 100.0% | 59.8% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.58e-01 | 82.2% | 85.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3300848 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.86 | 39.0 | 3.68e-01 | 96.7% | 38.8% |
| 4033114 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.59 | 50.0 | 4.36e-01 | 91.1% | 93.8% |
| 2579126 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.53 | 44.0 | 3.74e-01 | 88.9% | 72.2% |
| 5028505 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.53 | 43.0 | 3.71e-01 | 87.8% | 72.9% |