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NC_071039.1__YP_010679079.1__PQE65_gp135__00346

Bact-Vir

NC_071039.1__YP_010679079.1__PQE65_gp135__00346

Identity

Accession:
NC_071039 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-73
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.77 53.0 4.03e-01 71.2% 90.9%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.77 54.0 5.19e-01 79.5% 64.3%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.76 62.0 4.82e-01 87.7% 81.3%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.73 60.0 4.50e-01 87.7% 60.8%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.73 55.0 4.32e-01 78.1% 83.6%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.70 57.0 4.64e-01 90.4% 82.9%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.70 50.0 3.98e-01 76.7% 53.0%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.69 55.0 4.46e-01 86.3% 71.2%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.69 53.0 4.39e-01 83.6% 86.4%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 50.0 4.22e-01 78.1% 92.7%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.69 56.0 4.18e-01 87.7% 64.4%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 54.0 4.34e-01 83.6% 72.9%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 53.0 4.35e-01 83.6% 75.6%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 50.0 3.24e-01 79.5% 47.0%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 53.0 4.27e-01 83.6% 71.9%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 45.0 3.64e-01 71.2% 43.4%
2iecD00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.66 46.0 3.91e-01 72.6% 100.0%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 48.0 3.87e-01 78.1% 57.4%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 51.0 4.11e-01 82.2% 70.9%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 53.0 4.05e-01 87.7% 84.1%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.65 46.0 3.21e-01 74.0% 61.5%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 47.0 3.04e-01 78.1% 32.8%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 50.0 3.97e-01 83.6% 43.4%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.64 46.0 3.36e-01 76.7% 37.1%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.64 46.0 3.72e-01 75.3% 77.2%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 53.0 4.28e-01 90.4% 57.8%
6f91A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 49.0 3.26e-01 82.2% 56.8%
1w1wA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 50.0 3.37e-01 86.3% 40.5%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.63 53.0 4.17e-01 94.5% 86.0%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.63 38.0 3.20e-01 82.2% 33.6%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.63 48.0 3.40e-01 91.8% 26.3%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 49.0 3.89e-01 86.3% 84.3%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.62 48.0 4.07e-01 83.6% 58.2%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.62 44.0 3.55e-01 75.3% 79.5%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.62 53.0 4.13e-01 95.9% 85.2%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 50.0 3.21e-01 89.0% 34.5%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 48.0 3.74e-01 83.6% 40.4%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 43.0 3.46e-01 84.9% 36.2%
3a57A00 2.60.270.30 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin 0.61 51.0 4.00e-01 91.8% 87.0%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.61 50.0 4.05e-01 89.0% 76.3%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.60 50.0 3.33e-01 91.8% 50.0%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 46.0 2.93e-01 80.8% 51.0%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.60 45.0 2.96e-01 83.6% 42.3%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 44.0 3.52e-01 83.6% 38.9%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.58 51.0 4.06e-01 95.9% 100.0%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 51.0 4.17e-01 100.0% 96.4%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.58 42.0 3.44e-01 78.1% 85.3%
3p0lD00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 48.0 3.65e-01 93.2% 53.5%
2rqxA00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 3.93e-01 74.0% 93.8%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.73e-01 93.2% 58.6%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 39.0 3.63e-01 72.6% 92.5%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 3.80e-01 91.8% 70.3%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.55 39.0 3.77e-01 76.7% 64.0%
1cgtA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 40.0 3.75e-01 80.8% 95.7%
3edfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 38.0 3.70e-01 74.0% 98.8%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.06e-01 100.0% 64.5%
6f90A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 43.0 3.05e-01 95.9% 98.2%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.53 39.0 3.02e-01 80.8% 68.5%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.18e-01 90.4% 57.7%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.84 59.0 5.58e-01 79.5% 62.4%
5042514 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.78 54.0 3.90e-01 71.2% 100.0%
3478270 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.75 53.0 3.14e-01 74.0% 28.9%
5057652 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.74 56.0 3.83e-01 80.8% 70.0%
5047048 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.73 51.0 3.73e-01 72.6% 100.0%
5025460 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.73 44.0 4.68e-01 72.6% 69.2%
3394646 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.71 56.0 4.12e-01 84.9% 81.6%
3387958 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.70 49.0 3.80e-01 75.3% 34.2%
3706360 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 54.0 3.48e-01 83.6% 30.2%
3957060 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.69 57.0 4.57e-01 90.4% 89.0%
3739310 3321.1.1.1 a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander 0.69 48.0 3.72e-01 72.6% 41.2%
3715886 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 53.0 3.39e-01 83.6% 24.1%
3999576 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.69 61.0 4.74e-01 94.5% 82.8%
3643793 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 51.0 3.23e-01 80.8% 31.4%
4614038 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.68 54.0 4.31e-01 83.6% 72.9%
4046583 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.67 53.0 4.32e-01 83.6% 74.6%
4927380 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.67 57.0 3.84e-01 91.8% 26.5%
3585370 5.1.3.112 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40_2 0.67 48.0 3.34e-01 75.3% 35.4%
3332798 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.67 53.0 4.00e-01 86.3% 81.7%
3664957 5084.5.1.57 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28611 0.67 47.0 3.02e-01 74.0% 20.3%
3266554 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.67 50.0 4.85e-01 79.5% 72.5%
5036807 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.66 55.0 5.03e-01 90.4% 95.8%
5038973 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 57.0 3.61e-01 95.9% 88.0%
4195832 9.1.1.24 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.65 52.0 4.26e-01 84.9% 76.2%
3243889 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.65 50.0 3.71e-01 82.2% 55.7%
3507129 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.65 44.0 3.41e-01 71.2% 45.3%
4937958 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.65 47.0 3.04e-01 75.3% 65.2%
3215691 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 53.0 3.47e-01 87.7% 24.7%
None 0.65 47.0 3.01e-01 75.3% 36.7%
5059555 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 50.0 3.20e-01 84.9% 34.7%
3487462 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 52.0 4.29e-01 87.7% 75.4%
3785709 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.64 48.0 3.04e-01 80.8% 28.6%
3953302 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.64 53.0 4.66e-01 89.0% 63.5%
4498611 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.64 46.0 3.34e-01 75.3% 87.9%
4033134 3264.1.1.0 0.64 53.0 4.19e-01 91.8% 46.0%
5045322 331.6.1.0 a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain 0.64 49.0 4.10e-01 90.4% 48.0%
3745663 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 54.0 4.04e-01 91.8% 82.1%
4989818 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.63 53.0 3.73e-01 91.8% 53.2%
4970213 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 49.0 3.24e-01 87.7% 37.3%
3416070 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.38e-01 93.2% 93.8%
5063612 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.62 43.0 3.19e-01 71.2% 46.3%
3230371 3180.1.1.0 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.61 51.0 4.48e-01 91.8% 68.2%
5014493 331.3.1.12 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like 0.61 52.0 3.64e-01 93.2% 34.3%
5014159 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.61 51.0 4.20e-01 90.4% 64.8%
3763572 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 51.0 4.06e-01 95.9% 87.7%
4969870 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 50.0 3.18e-01 91.8% 28.1%
3224967 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 48.0 3.25e-01 84.9% 25.9%
3962450 9.27.1.0 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.60 51.0 4.52e-01 93.2% 92.4%
4954892 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.60 48.0 3.09e-01 87.7% 33.2%
3784810 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.60 48.0 4.39e-01 86.3% 91.6%
4888475 11.8.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like › TDH 0.60 50.0 3.99e-01 94.5% 94.1%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.60 50.0 4.41e-01 93.2% 89.1%
3352484 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.59 53.0 3.35e-01 100.0% 91.2%
4945114 4252.1.1.10 beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.59 42.0 3.09e-01 74.0% 45.0%
3437488 5.1.3.159 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 0.59 46.0 3.13e-01 86.3% 57.9%
3482455 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 46.0 3.35e-01 86.3% 52.4%
5037589 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 50.0 3.22e-01 98.6% 86.8%
3584281 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.58 48.0 3.19e-01 90.4% 30.7%
3415735 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.57 46.0 4.26e-01 89.0% 91.6%
3331262 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.57 45.0 4.13e-01 86.3% 88.4%
5033173 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.56 47.0 4.19e-01 97.3% 83.5%
None 0.56 46.0 3.70e-01 89.0% 62.1%
3430171 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 2.81e-01 90.4% 20.0%
3620045 883.1.1.6 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N 0.55 46.0 3.70e-01 95.9% 60.0%
3915600 109.4.1.109 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.55 50.0 2.79e-01 100.0% 34.0%
3232904 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 44.0 3.03e-01 84.9% 32.0%
7054 881.2.1.1 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like › DUF3242 0.53 43.0 3.66e-01 91.8% 85.0%
4985494 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.52 45.0 2.81e-01 100.0% 74.9%
3272654 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 35.0 3.21e-01 71.2% 66.0%
D2 medium residues 74-141
PDB
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.80 55.0 5.11e-01 73.5% 57.6%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.77 67.0 5.08e-01 100.0% 81.4%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 54.0 4.23e-01 77.9% 36.5%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.76 66.0 5.99e-01 97.1% 71.7%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.76 66.0 6.15e-01 100.0% 78.3%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.76 63.0 4.84e-01 98.5% 40.0%
4fvaC00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.75 58.0 3.87e-01 100.0% 22.3%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.74 64.0 5.80e-01 97.1% 70.2%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.74 52.0 4.92e-01 75.0% 100.0%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.73 65.0 5.96e-01 100.0% 77.5%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 59.0 4.56e-01 100.0% 39.7%
3hnrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 64.0 4.59e-01 100.0% 48.2%
2iruA02 3.30.70.3300 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 51.0 4.09e-01 76.5% 39.1%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.70 58.0 5.77e-01 100.0% 90.0%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 46.0 4.59e-01 76.5% 64.8%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.70 58.0 5.72e-01 100.0% 86.3%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.70 51.0 4.06e-01 77.9% 42.3%
3dmgA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 54.0 4.09e-01 98.5% 33.3%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.69 60.0 5.49e-01 100.0% 76.3%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.69 45.0 4.38e-01 75.0% 59.7%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 49.0 4.69e-01 75.0% 64.1%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.69 57.0 5.42e-01 100.0% 76.8%
1j5uA01 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.69 48.0 4.10e-01 75.0% 43.6%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.69 50.0 4.18e-01 77.9% 56.8%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.68 53.0 5.35e-01 95.6% 88.1%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 56.0 4.05e-01 100.0% 32.1%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.68 60.0 4.02e-01 100.0% 27.4%
3g7uA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 61.0 4.42e-01 100.0% 37.2%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 48.0 4.53e-01 85.3% 61.2%
1akoA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.68 55.0 3.69e-01 100.0% 22.8%
2fl4A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 57.0 4.95e-01 98.5% 61.5%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.67 43.0 3.56e-01 72.1% 35.7%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 49.0 4.63e-01 77.9% 93.9%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 49.0 4.41e-01 77.9% 56.4%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.67 58.0 3.98e-01 100.0% 32.3%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.66 56.0 5.21e-01 100.0% 75.9%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.66 46.0 4.37e-01 75.0% 61.0%
2di8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 49.0 4.42e-01 91.2% 57.4%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.65 46.0 4.44e-01 80.9% 63.4%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.65 55.0 4.72e-01 100.0% 58.6%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 46.0 4.02e-01 76.5% 51.9%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.65 46.0 3.62e-01 75.0% 37.1%
2h00B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 54.0 3.89e-01 98.5% 31.0%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.64 41.0 4.13e-01 72.1% 63.4%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.64 44.0 4.19e-01 76.5% 59.8%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.64 45.0 4.21e-01 76.5% 63.3%
2qyxB01 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.63 45.0 3.90e-01 76.5% 84.4%
2y8yA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.63 45.0 4.15e-01 75.0% 73.3%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 48.0 3.89e-01 85.3% 84.9%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.62 55.0 4.94e-01 100.0% 84.2%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.62 43.0 4.27e-01 75.0% 69.3%
3cxjA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 46.0 3.64e-01 80.9% 53.5%
2cdqA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 43.0 4.06e-01 75.0% 59.5%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.61 44.0 4.30e-01 75.0% 63.6%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 42.0 3.97e-01 73.5% 66.7%
2g0iA00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.61 48.0 4.17e-01 89.7% 61.3%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.61 45.0 4.08e-01 79.4% 65.6%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 42.0 4.10e-01 77.9% 66.7%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.60 45.0 4.00e-01 80.9% 67.7%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.60 43.0 3.40e-01 76.5% 91.1%
3rghA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 4.07e-01 91.2% 58.3%
4lubB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 50.0 4.44e-01 95.6% 65.0%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 49.0 4.15e-01 95.6% 92.8%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.59 42.0 3.78e-01 76.5% 71.7%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.59 41.0 3.38e-01 76.5% 40.7%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.28e-01 92.6% 85.0%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.58 49.0 4.33e-01 94.1% 92.1%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 49.0 4.05e-01 97.1% 98.5%
1s9iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 41.0 3.74e-01 75.0% 57.0%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 40.0 4.07e-01 80.9% 73.5%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 4.46e-01 95.6% 100.0%
3uc4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 46.0 4.28e-01 88.2% 78.8%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.57 50.0 3.82e-01 100.0% 100.0%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.56 35.0 3.14e-01 72.1% 40.6%
4er8A00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.56 41.0 3.19e-01 79.4% 37.0%
5tkwA01 3.30.420.380 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.56 43.0 3.31e-01 86.8% 86.5%
6lgqC01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.55 47.0 3.84e-01 97.1% 90.1%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.55 40.0 3.63e-01 80.9% 69.7%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.99e-01 98.5% 77.7%
6bx7A02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 44.0 3.86e-01 100.0% 60.9%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 44.0 3.46e-01 98.5% 55.4%
2x7gA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 4.03e-01 94.1% 76.1%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.70e-01 98.5% 56.7%
2xhcA01 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.52 36.0 3.29e-01 72.1% 52.6%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.63e-01 91.2% 61.6%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 3.92e-01 100.0% 65.4%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 45.0 4.26e-01 100.0% 81.7%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 42.0 3.97e-01 92.6% 76.5%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 42.0 3.56e-01 95.6% 92.6%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.50 38.0 3.22e-01 82.4% 59.8%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3639962 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.80 71.0 6.59e-01 100.0% 84.7%
3737802 3914.1.1.0 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.76 53.0 3.07e-01 75.0% 8.0%
4806761 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.76 52.0 4.44e-01 72.1% 45.7%
4771543 327.3.1.0 a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain 0.74 64.0 6.44e-01 97.1% 97.1%
4870414 304.161.1.1 a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in TMEM16 lipid scramblase › Alpha-beta plait domain in TMEM16 lipid scramblase › Anoctamin_N 0.74 53.0 4.19e-01 75.0% 38.7%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.72 55.0 5.52e-01 100.0% 81.4%
3244833 3914.1.1.2 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.72 57.0 3.25e-01 86.8% 33.9%
4553110 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.72 63.0 5.26e-01 100.0% 75.8%
3329735 327.11.2.37 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st 0.72 52.0 5.18e-01 76.5% 75.7%
4029970 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.71 50.0 4.75e-01 75.0% 62.5%
4091138 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.71 50.0 4.56e-01 75.0% 55.6%
4089543 304.24.1.21 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C+EFG_III 0.71 50.0 3.55e-01 75.0% 25.0%
3633119 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.71 60.0 4.08e-01 100.0% 26.1%
3695902 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.70 49.0 3.55e-01 75.0% 25.6%
3381288 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.70 49.0 4.60e-01 75.0% 58.8%
4063927 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.70 49.0 3.56e-01 75.0% 26.3%
3724442 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.69 49.0 4.87e-01 75.0% 74.3%
4133554 304.24.1.21 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C+EFG_III 0.69 48.0 3.52e-01 75.0% 26.3%
4523274 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.69 48.0 3.47e-01 75.0% 25.6%
3521725 327.11.2.55 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26774 0.69 48.0 4.48e-01 75.0% 58.8%
3625482 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 50.0 4.41e-01 79.4% 61.0%
4025594 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.69 47.0 4.71e-01 76.5% 70.0%
3171307 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.68 46.0 3.88e-01 73.5% 40.9%
4966161 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.62e-01 98.5% 89.0%
3755164 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.68 49.0 4.75e-01 76.5% 72.0%
4506985 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.68 59.0 5.17e-01 100.0% 75.2%
4932448 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.68 48.0 4.46e-01 76.5% 65.6%
4675260 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.68 58.0 4.97e-01 100.0% 71.3%
144952 304.5.1.10 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CBD_PlyG 0.68 48.0 4.53e-01 85.3% 61.2%
4972219 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 57.0 5.53e-01 100.0% 84.0%
4514876 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.67 48.0 4.83e-01 76.5% 82.9%
4996908 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 51.0 4.71e-01 82.4% 94.3%
5000862 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.67 52.0 3.52e-01 86.8% 30.8%
4484852 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.66 58.0 4.91e-01 100.0% 81.7%
3626407 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.66 46.0 4.75e-01 73.5% 78.5%
3726634 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.66 48.0 4.54e-01 76.5% 65.0%
4998201 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.66 47.0 4.45e-01 76.5% 63.5%
4959193 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.66 48.0 4.46e-01 76.5% 62.4%
3415465 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 57.0 5.38e-01 100.0% 82.4%
3991710 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.65 47.0 4.48e-01 76.5% 66.3%
3211790 327.11.2.27 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin 0.65 46.0 4.50e-01 75.0% 76.0%
3343178 320.2.1.0 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain 0.65 55.0 5.58e-01 100.0% 100.0%
3253272 2003.1.5.54 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.65 56.0 3.68e-01 100.0% 21.9%
5050881 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 47.0 3.96e-01 77.9% 48.7%
3473575 327.11.2.27 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin 0.64 46.0 4.43e-01 76.5% 80.0%
3898070 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 54.0 5.42e-01 97.1% 98.6%
3634662 327.11.2.19 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_11 0.64 46.0 4.24e-01 76.5% 72.2%
5080958 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.64 49.0 4.77e-01 83.8% 98.7%
3407270 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 45.0 4.36e-01 75.0% 69.3%
210670 2.1.1.95 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.63 48.0 3.99e-01 85.3% 90.1%
5027652 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 55.0 5.00e-01 100.0% 72.6%
3603204 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.63 43.0 4.41e-01 75.0% 73.8%
5023724 2.1.1.95 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.62 44.0 3.55e-01 76.5% 37.8%
3591554 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.62 53.0 5.19e-01 100.0% 93.3%
3519958 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.62 44.0 4.45e-01 76.5% 77.1%
4018430 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.62 44.0 3.07e-01 76.5% 21.7%
3898738 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.62 43.0 4.19e-01 76.5% 66.7%
5000612 304.19.1.0 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain 0.62 43.0 4.29e-01 76.5% 71.4%
3953697 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.61 47.0 4.18e-01 79.4% 64.2%
3206607 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 53.0 5.27e-01 100.0% 100.0%
3290652 306.2.1.0 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.61 53.0 4.90e-01 100.0% 78.9%
3574902 327.11.2.30 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DUF7636 0.61 42.0 3.83e-01 75.0% 51.5%
5016171 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.02e-01 100.0% 44.4%
3736978 304.126.1.2 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.60 43.0 3.71e-01 76.5% 47.0%
3616815 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.60 42.0 4.43e-01 75.0% 98.3%
5065478 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.60 43.0 3.99e-01 76.5% 63.6%
3962210 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 41.0 4.20e-01 75.0% 73.8%
4003644 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 42.0 3.15e-01 73.5% 41.1%
4928657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 4.25e-01 92.6% 71.8%
4034525 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.59 41.0 4.19e-01 75.0% 76.9%
4933713 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.59 41.0 4.18e-01 75.0% 76.9%
5072239 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.59 42.0 3.88e-01 76.5% 58.9%
5041064 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.59 44.0 4.03e-01 79.4% 66.3%
1159021 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.59 41.0 4.09e-01 73.5% 70.4%
3940990 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 40.0 4.03e-01 75.0% 70.0%
3969012 101.1.2.485 alpha arrays › HTH › HTH › winged helix domain › DUF2513 0.58 49.0 4.59e-01 100.0% 76.7%
5031157 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.58 40.0 4.10e-01 72.1% 76.9%
3268478 3122.1.1.0 a+b complex topology › MESD › MESD › MESD 0.57 41.0 3.89e-01 77.9% 69.4%
4942376 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.57 44.0 3.86e-01 88.2% 72.7%
3267853 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.57 49.0 3.46e-01 100.0% 30.5%
3235469 309.1.1.8 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.56 45.0 3.17e-01 92.6% 53.1%
3840480 327.11.2.39 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 0.56 38.0 3.76e-01 73.5% 65.3%
4931479 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.56 38.0 3.76e-01 75.0% 66.7%
3727039 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 46.0 3.16e-01 100.0% 24.4%
3892187 327.11.2.39 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 0.55 37.0 3.68e-01 73.5% 65.3%
5011597 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.55 44.0 4.04e-01 98.5% 65.7%
4996918 3685.1.1.1 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA 0.54 45.0 4.35e-01 98.5% 98.8%
4025104 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.53 45.0 4.29e-01 98.5% 85.0%
3515401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 3.77e-01 100.0% 74.2%
5062261 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.52 42.0 3.71e-01 88.2% 64.0%
3420495 309.1.1.8 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.52 43.0 3.01e-01 95.6% 48.2%
5010964 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.51 41.0 3.77e-01 98.5% 65.0%
3924000 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.51 35.0 3.56e-01 75.0% 71.4%
3784938 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 35.0 3.39e-01 73.5% 62.5%