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NC_071040.1__YP_010679179.1__PQE66_gp001__00001

Bact-Vir

NC_071040.1__YP_010679179.1__PQE66_gp001__00001

Identity

Accession:
NC_071040 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Haetaevirus› Bacillus_phage_PBC2

TaxID: 1675029

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 139-220
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.69 60.0 4.58e-01 95.1% 85.1%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.68 53.0 4.14e-01 81.7% 80.1%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.67 58.0 4.55e-01 95.1% 90.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 38.0 4.67e-01 80.5% 97.9%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.66 48.0 4.34e-01 75.6% 65.1%
2k3aA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 45.0 4.25e-01 82.9% 59.0%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 41.0 4.60e-01 78.0% 88.7%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 45.0 4.06e-01 81.7% 93.2%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 49.0 3.86e-01 92.7% 81.0%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 4.28e-01 96.3% 98.6%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 50.0 4.07e-01 96.3% 85.1%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.21e-01 79.3% 85.9%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 47.0 3.70e-01 92.7% 79.4%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.80e-01 96.3% 78.3%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 42.0 3.61e-01 78.0% 67.4%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 42.0 4.64e-01 82.9% 100.0%
1cpyA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 42.0 2.80e-01 80.5% 61.6%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 41.0 3.55e-01 76.8% 65.6%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 4.00e-01 96.3% 83.2%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.78e-01 96.3% 86.9%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.98e-01 96.3% 86.9%
1g0sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 42.0 3.12e-01 80.5% 60.7%
3kg7B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 40.0 2.78e-01 76.8% 62.5%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.55 42.0 3.95e-01 85.4% 94.3%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 38.0 3.27e-01 73.2% 63.4%
4g59C01 2.60.40.2920 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.79e-01 79.3% 98.1%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 37.0 3.82e-01 76.8% 72.5%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.54 41.0 3.81e-01 84.1% 87.3%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 39.0 3.17e-01 76.8% 57.4%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.61e-01 73.2% 71.0%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.53 36.0 3.18e-01 72.0% 81.1%
5f7pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 39.0 3.49e-01 80.5% 99.2%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 36.0 3.51e-01 76.8% 63.7%
3o2zF00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.70e-01 72.0% 100.0%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 40.0 3.82e-01 85.4% 86.7%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 36.0 3.09e-01 73.2% 85.2%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 37.0 3.04e-01 78.0% 76.2%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.51 34.0 3.15e-01 70.7% 65.2%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 36.0 3.05e-01 75.6% 81.9%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.81 56.0 6.20e-01 87.8% 89.2%
5032977 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 61.0 6.19e-01 92.7% 90.0%
3616618 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 53.0 3.38e-01 79.3% 30.9%
3593811 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 54.0 4.68e-01 81.7% 95.2%
3237220 220.1.1.84 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.70 53.0 4.77e-01 81.7% 76.5%
3617025 220.1.1.56 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.68 52.0 4.51e-01 81.7% 68.0%
3391222 220.1.1.207 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF25916 0.67 52.0 4.46e-01 81.7% 72.8%
1346676 3347.1.1.1 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 0.66 48.0 4.34e-01 75.6% 65.1%
4022796 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.66 51.0 4.28e-01 82.9% 96.5%
3631831 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.65 51.0 3.85e-01 85.4% 97.1%
3471871 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 51.0 4.45e-01 85.4% 78.0%
3188574 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.64 44.0 4.88e-01 85.4% 90.8%
3719371 101.1.12.0 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.63 45.0 3.94e-01 75.6% 67.2%
4990685 2484.1.1.22 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 0.63 46.0 3.58e-01 79.3% 81.1%
4493776 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 47.0 4.99e-01 79.3% 100.0%
4029094 3257.1.1.0 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.62 52.0 3.95e-01 93.9% 55.5%
5012336 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.61 47.0 3.77e-01 84.1% 75.1%
3272573 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.61 45.0 4.69e-01 79.3% 94.7%
4127407 2484.1.1.22 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 0.61 45.0 3.56e-01 80.5% 83.9%
3287628 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 43.0 4.79e-01 80.5% 95.3%
3742752 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.60 51.0 3.81e-01 93.9% 58.5%
4431772 3222.1.1.1 ↗ a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory 0.60 43.0 3.03e-01 82.9% 22.9%
5043517 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.60 44.0 3.44e-01 79.3% 76.8%
3940101 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 42.0 3.72e-01 74.4% 55.0%
3785320 9.14.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 0.59 45.0 3.73e-01 85.4% 90.6%
4504902 3222.1.1.1 ↗ a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory 0.59 43.0 2.91e-01 82.9% 20.3%
3939687 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.59 44.0 4.15e-01 80.5% 91.0%
3947082 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 40.0 3.92e-01 76.8% 64.4%
3645476 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.58 43.0 4.07e-01 79.3% 87.0%
3201065 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.58 50.0 3.76e-01 98.8% 57.7%
4100001 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.58 48.0 3.82e-01 96.3% 80.3%
3990705 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 47.0 3.74e-01 92.7% 87.8%
3826751 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 42.0 4.30e-01 85.4% 80.0%
3744143 220.1.1.32 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.57 43.0 3.56e-01 80.5% 61.3%
3370997 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.57 41.0 3.41e-01 75.6% 80.4%
3827531 844.1.1.5 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 0.56 42.0 2.97e-01 79.3% 91.2%
5009292 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.56 39.0 2.83e-01 73.2% 34.6%
3351393 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 39.0 3.76e-01 72.0% 84.2%
3277055 2008.1.1.79 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pet127 0.56 41.0 2.63e-01 79.3% 24.1%
3924626 2484.1.1.4 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.56 39.0 3.89e-01 72.0% 83.5%
3996028 11.2.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.56 41.0 3.63e-01 78.0% 96.7%
5078784 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.56 39.0 2.73e-01 73.2% 34.0%
5012403 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 44.0 3.50e-01 85.4% 52.1%
5045702 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.55 40.0 2.82e-01 74.4% 38.0%
857 9.3.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII 0.55 42.0 3.92e-01 84.1% 91.7%
4483091 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 42.0 3.91e-01 81.7% 65.7%
3358595 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 40.0 3.91e-01 78.0% 83.3%
4975528 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 42.0 3.58e-01 86.6% 99.3%
3326860 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.54 37.0 3.72e-01 70.7% 84.7%
4979196 241.1.1.6 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN 0.54 39.0 3.45e-01 76.8% 72.0%
3348291 243.1.1.53 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › WI12 0.54 39.0 3.21e-01 78.0% 44.9%
4227879 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.54 41.0 2.55e-01 81.7% 68.1%
4983682 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 41.0 3.47e-01 98.8% 48.6%
3597435 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.81e-01 89.0% 71.2%
4966380 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 39.0 2.72e-01 78.0% 31.9%
3419195 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.53 43.0 2.98e-01 89.0% 62.1%
4960428 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 38.0 2.67e-01 74.4% 36.4%
3492201 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.52 37.0 3.88e-01 76.8% 80.0%
3979492 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.52 37.0 2.57e-01 74.4% 32.4%
3718969 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.51 41.0 3.30e-01 90.2% 83.4%
5075261 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 38.0 2.68e-01 79.3% 31.3%
3808070 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 37.0 3.21e-01 75.6% 57.7%
4947582 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.51 36.0 2.55e-01 74.4% 80.4%
4932967 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 38.0 2.62e-01 79.3% 28.5%
3797033 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 37.0 3.08e-01 78.0% 49.0%
4977257 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.50 36.0 2.56e-01 73.2% 37.2%
D2 medium residues 51-134
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.71e-01 81.0% 100.0%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 44.0 2.91e-01 70.2% 40.6%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.64 46.0 4.64e-01 77.4% 75.9%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.63 43.0 3.99e-01 72.6% 78.8%
3t7aA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 54.0 4.11e-01 98.8% 44.1%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 44.0 3.91e-01 76.2% 94.4%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 43.0 2.89e-01 73.8% 74.1%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.61 46.0 3.83e-01 79.8% 67.1%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.60 42.0 2.94e-01 82.1% 21.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.45e-01 89.3% 83.6%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.60 48.0 3.29e-01 88.1% 92.6%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.60 44.0 4.11e-01 79.8% 76.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.75e-01 83.3% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 37.0 4.13e-01 75.0% 81.2%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.59 48.0 3.60e-01 88.1% 55.6%
3vcaA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 41.0 3.71e-01 75.0% 88.2%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.58 42.0 3.62e-01 78.6% 82.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.40e-01 77.4% 100.0%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 42.0 3.79e-01 77.4% 82.2%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.43e-01 73.8% 100.0%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.45e-01 73.8% 73.8%
2b1xA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.57 41.0 3.59e-01 75.0% 86.5%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 3.41e-01 88.1% 73.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 3.96e-01 78.6% 78.3%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 40.0 4.24e-01 72.6% 90.3%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 43.0 2.86e-01 81.0% 73.4%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 3.61e-01 90.5% 94.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 4.01e-01 83.3% 83.3%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.56 40.0 3.57e-01 76.2% 93.7%
2zxkA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.56 48.0 3.46e-01 97.6% 98.1%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 4.25e-01 83.3% 96.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.56 41.0 4.53e-01 84.5% 100.0%
3f1sA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 38.0 3.15e-01 71.4% 90.0%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.93e-01 88.1% 97.5%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 4.17e-01 98.8% 99.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.54 32.0 3.79e-01 72.6% 94.2%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 41.0 2.90e-01 84.5% 83.9%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 4.05e-01 86.9% 85.4%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 34.0 3.78e-01 84.5% 91.9%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995784 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.80e-01 90.5% 96.0%
3228256 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 46.0 3.20e-01 71.4% 72.5%
3926624 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.66 31.0 3.80e-01 84.5% 70.0%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 41.0 4.88e-01 91.7% 100.0%
3784334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 41.0 4.68e-01 77.4% 91.7%
3742045 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.62 43.0 3.80e-01 72.6% 71.5%
3315951 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.62 49.0 5.04e-01 84.5% 100.0%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 39.0 4.64e-01 90.5% 98.2%
5075159 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.61 42.0 3.35e-01 70.2% 74.5%
3790336 5.1.3.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_Rol-3 0.61 43.0 3.16e-01 73.8% 74.5%
5041549 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 43.0 3.02e-01 73.8% 84.7%
3783252 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 49.0 3.23e-01 88.1% 95.1%
3374974 5.1.3.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.60 44.0 3.27e-01 78.6% 60.9%
4243044 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.60 50.0 3.95e-01 90.5% 94.1%
3588251 6043.1.1.3 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.60 42.0 4.16e-01 82.1% 68.9%
5016556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.45e-01 81.0% 85.6%
4119968 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 41.0 2.62e-01 72.6% 47.6%
3660922 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.59 38.0 4.26e-01 76.2% 84.6%
3581896 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.59 39.0 4.29e-01 78.6% 86.2%
4102120 220.1.1.190 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26660 0.59 41.0 3.67e-01 72.6% 78.3%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.69e-01 79.8% 96.9%
3637723 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.59 46.0 2.94e-01 83.3% 85.0%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 40.0 4.52e-01 91.7% 100.0%
4256135 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.58 48.0 3.69e-01 89.3% 87.4%
3174935 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 46.0 3.05e-01 88.1% 90.5%
3709029 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.34e-01 85.7% 95.0%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 37.0 4.40e-01 77.4% 100.0%
3202006 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 45.0 2.89e-01 83.3% 88.6%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.58 37.0 4.24e-01 78.6% 100.0%
3517387 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 42.0 2.94e-01 77.4% 90.3%
3992786 11.1.1.1176 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-prop_Rol-3 0.57 44.0 3.03e-01 82.1% 42.0%
5057301 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 42.0 3.08e-01 78.6% 56.1%
5022491 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.57 45.0 4.49e-01 88.1% 84.7%
3888854 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.57 49.0 4.19e-01 95.2% 91.1%
3651964 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.56 40.0 3.55e-01 88.1% 51.7%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.56 36.0 4.03e-01 82.1% 84.6%
3904452 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 43.0 3.97e-01 84.5% 87.8%
3867284 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 43.0 2.69e-01 84.5% 18.7%
3366578 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.56 40.0 3.55e-01 88.1% 51.7%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 4.29e-01 91.7% 98.3%
3707634 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 36.0 4.17e-01 78.6% 100.0%
3990338 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 41.0 2.95e-01 82.1% 82.9%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.84e-01 84.5% 71.8%
3628265 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 47.0 3.04e-01 100.0% 91.5%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 34.0 3.72e-01 84.5% 84.6%
4680746 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.53 38.0 3.96e-01 76.2% 84.0%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.53 42.0 3.95e-01 95.2% 71.4%
4961699 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 44.0 3.50e-01 95.2% 90.3%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 4.31e-01 91.7% 98.8%
4957034 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 43.0 2.85e-01 92.9% 97.0%
3624850 331.9.1.9 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.51 36.0 3.37e-01 73.8% 69.5%
3233672 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.51 38.0 3.64e-01 81.0% 76.0%