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NC_071040.1__YP_010679278.1__PQE66_gp100__00100
Bact-VirNC_071040.1__YP_010679278.1__PQE66_gp100__00100
Identity
- Accession:
- NC_071040 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Taxonomy
TaxID: 1675029
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-80
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ti2B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 44.0 | 4.20e-01 | 71.8% | 52.4% |
| 5fmvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 49.0 | 4.61e-01 | 97.2% | 60.7% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.69 | 44.0 | 3.74e-01 | 70.4% | 41.6% |
| 3tp4B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 46.0 | 4.14e-01 | 73.2% | 53.8% |
| 5jtwA05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.67 | 45.0 | 3.72e-01 | 73.2% | 40.5% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 46.0 | 3.68e-01 | 74.6% | 39.4% |
| 7sf2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 49.0 | 4.53e-01 | 97.2% | 64.5% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 46.0 | 4.15e-01 | 80.3% | 56.1% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.63 | 44.0 | 3.86e-01 | 73.2% | 51.4% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 43.0 | 3.45e-01 | 70.4% | 40.9% |
| 1d2oA01 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.62 | 43.0 | 3.74e-01 | 71.8% | 49.5% |
| 2pn5A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.62 | 46.0 | 4.11e-01 | 91.5% | 57.3% |
| 4bwcA01 | 2.10.70.60 | Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 | 0.61 | 34.0 | 3.77e-01 | 78.9% | 69.8% |
| 1w15A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.61 | 50.0 | 4.07e-01 | 93.0% | 47.7% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 43.0 | 3.55e-01 | 74.6% | 64.3% |
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.61 | 53.0 | 4.91e-01 | 100.0% | 77.5% |
| 3eb7A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 41.0 | 3.16e-01 | 73.2% | 39.6% |
| 1rj8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 42.0 | 3.42e-01 | 76.1% | 64.3% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 3.98e-01 | 97.2% | 62.1% |
| 3l5iA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.18e-01 | 97.2% | 67.0% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 40.0 | 3.14e-01 | 74.6% | 47.8% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.57 | 41.0 | 3.19e-01 | 76.1% | 52.1% |
| 5bviA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 47.0 | 3.53e-01 | 91.5% | 91.8% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.56 | 44.0 | 4.18e-01 | 85.9% | 100.0% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.56 | 44.0 | 3.85e-01 | 91.5% | 56.6% |
| 3gqqA00 | 2.70.50.40 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit | 0.56 | 47.0 | 3.57e-01 | 93.0% | 41.3% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.55 | 50.0 | 3.70e-01 | 100.0% | 89.3% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.05e-01 | 93.0% | 60.0% |
| 1zq7A01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.55 | 49.0 | 4.08e-01 | 100.0% | 67.7% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 4.19e-01 | 93.0% | 98.9% |
| 2q3xA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 46.0 | 3.73e-01 | 97.2% | 62.0% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 3.88e-01 | 93.0% | 60.9% |
| 1ajwA00 | 2.70.50.30 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › Coagulation Factor XIII, subunit A, domain 1 | 0.53 | 44.0 | 3.49e-01 | 91.5% | 44.1% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.65e-01 | 77.5% | 87.4% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.53 | 39.0 | 4.08e-01 | 95.8% | 91.8% |
| 2e56A00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.20e-01 | 85.9% | 50.7% |
| 1kshB00 | 2.70.50.40 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit | 0.50 | 44.0 | 3.50e-01 | 97.2% | 63.4% |
| 7kx7A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 40.0 | 2.93e-01 | 90.1% | 91.6% |
| 1vq8B03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.50 | 42.0 | 3.73e-01 | 97.2% | 77.5% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3578278 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.73 | 49.0 | 5.15e-01 | 95.8% | 76.9% |
| 5068205 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 47.0 | 4.26e-01 | 73.2% | 50.5% |
| 3909795 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.69 | 51.0 | 4.46e-01 | 97.2% | 53.4% |
| 3525544 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 47.0 | 4.32e-01 | 73.2% | 56.7% |
| 3921871 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.66 | 46.0 | 3.90e-01 | 73.2% | 51.3% |
| 4234325 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.66 | 46.0 | 3.47e-01 | 73.2% | 44.8% |
| 3572288 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 3.87e-01 | 71.8% | 60.9% |
| 4929344 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 50.0 | 4.00e-01 | 93.0% | 44.0% |
| 3749224 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.63 | 45.0 | 3.37e-01 | 74.6% | 31.2% |
| 184690 | 11.22.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Dispersin › Dispersin › CellEnv_BiogenAssoc | 0.63 | 46.0 | 4.15e-01 | 80.3% | 56.1% |
| 4135739 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.63 | 47.0 | 3.63e-01 | 85.9% | 37.8% |
| 5037079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.62e-01 | 74.6% | 86.2% |
| 3998159 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.62 | 51.0 | 4.12e-01 | 93.0% | 47.0% |
| 5057852 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 48.0 | 4.24e-01 | 93.0% | 57.1% |
| 4926800 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 46.0 | 4.07e-01 | 80.3% | 61.9% |
| 3366574 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.61 | 44.0 | 3.72e-01 | 76.1% | 50.8% |
| 5029289 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 49.0 | 4.03e-01 | 93.0% | 48.8% |
| 3484787 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.61 | 50.0 | 3.81e-01 | 93.0% | 51.4% |
| 4427418 | 11.1.1.1229 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27268 | 0.60 | 42.0 | 3.84e-01 | 73.2% | 82.1% |
| 3902166 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.60 | 48.0 | 4.66e-01 | 100.0% | 76.2% |
| 3766606 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.60 | 50.0 | 3.94e-01 | 93.0% | 44.1% |
| 3786134 | 11.1.1.646 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N | 0.60 | 51.0 | 3.98e-01 | 91.5% | 60.0% |
| 3875306 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.60 | 45.0 | 2.82e-01 | 80.3% | 16.6% |
| 5002134 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 48.0 | 4.42e-01 | 97.2% | 67.8% |
| 3931864 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 3.96e-01 | 93.0% | 50.8% |
| 3866213 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.60 | 43.0 | 3.42e-01 | 77.5% | 68.0% |
| 3471980 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.59 | 49.0 | 3.93e-01 | 93.0% | 45.7% |
| 3416793 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 49.0 | 3.79e-01 | 93.0% | 42.0% |
| 3180219 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.59 | 50.0 | 4.21e-01 | 93.0% | 66.7% |
| 3922466 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 3.55e-01 | 80.3% | 50.0% |
| 4955497 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.02e-01 | 98.6% | 55.5% |
| 4000432 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 50.0 | 3.99e-01 | 93.0% | 48.6% |
| 3628253 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 50.0 | 3.99e-01 | 93.0% | 48.1% |
| 3753737 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.58 | 42.0 | 3.36e-01 | 76.1% | 60.4% |
| 3184485 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.58 | 51.0 | 4.53e-01 | 100.0% | 84.3% |
| 3258181 | 11.2.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 | 0.58 | 51.0 | 3.61e-01 | 98.6% | 53.6% |
| 3995556 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 47.0 | 3.46e-01 | 93.0% | 33.7% |
| 3751376 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.58 | 43.0 | 3.39e-01 | 80.3% | 67.7% |
| 3273772 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.73e-01 | 97.2% | 83.5% |
| 4238211 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.58 | 49.0 | 4.31e-01 | 93.0% | 63.8% |
| 3802688 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 49.0 | 3.75e-01 | 93.0% | 41.2% |
| 3236478 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 49.0 | 3.84e-01 | 93.0% | 45.0% |
| 3889831 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 49.0 | 3.82e-01 | 93.0% | 46.7% |
| 3509844 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 51.0 | 3.87e-01 | 97.2% | 72.5% |
| 4072119 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.57 | 49.0 | 4.22e-01 | 93.0% | 60.9% |
| 4996989 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.57 | 49.0 | 4.27e-01 | 97.2% | 63.8% |
| 4660346 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.56 | 46.0 | 4.08e-01 | 91.5% | 62.0% |
| 4324318 | 11.1.1.230 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YBD | 0.56 | 47.0 | 3.82e-01 | 91.5% | 59.3% |
| 5034785 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 3.87e-01 | 76.1% | 64.7% |
| 3883339 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 49.0 | 3.92e-01 | 97.2% | 70.6% |
| 3789523 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 3.82e-01 | 97.2% | 60.0% |
| 3398162 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 47.0 | 3.61e-01 | 93.0% | 41.2% |
| 3472667 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 50.0 | 3.89e-01 | 97.2% | 48.3% |
| 3241319 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 40.0 | 3.30e-01 | 74.6% | 44.2% |
| 3680066 | 10.10.1.5 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 | 0.56 | 43.0 | 3.40e-01 | 84.5% | 76.8% |
| 3327078 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.55 | 36.0 | 2.49e-01 | 100.0% | 19.0% |
| 3517819 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.55 | 46.0 | 4.09e-01 | 93.0% | 65.0% |
| 4601124 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.55 | 46.0 | 4.08e-01 | 93.0% | 65.0% |
| 4878542 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 47.0 | 3.75e-01 | 97.2% | 59.5% |
| 3573136 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 49.0 | 3.74e-01 | 100.0% | 63.6% |
| 3609512 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 39.0 | 3.05e-01 | 74.6% | 53.8% |
| 4318282 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.54 | 46.0 | 4.06e-01 | 91.5% | 66.0% |
| 4594590 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.54 | 46.0 | 3.96e-01 | 93.0% | 60.0% |
| 1582 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.54 | 46.0 | 3.92e-01 | 93.0% | 62.5% |
| 4011399 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 47.0 | 3.89e-01 | 97.2% | 80.0% |
| 4993280 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.53 | 43.0 | 2.99e-01 | 88.7% | 62.1% |
| 3579723 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 41.0 | 4.28e-01 | 81.7% | 98.5% |
| 3578183 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 48.0 | 3.76e-01 | 100.0% | 75.9% |
| 3879226 | 382.1.1.3 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp | 0.52 | 41.0 | 3.93e-01 | 100.0% | 73.8% |
| 3909036 | 11.1.1.1056 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M, A2M_BRD, MG3 | 0.52 | 46.0 | 2.71e-01 | 97.2% | 32.0% |
| 3568625 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.51 | 35.0 | 2.95e-01 | 74.6% | 87.6% |
| 3734616 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.58e-01 | 97.2% | 65.2% |
| 164761 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.51 | 40.0 | 3.20e-01 | 85.9% | 50.7% |
| 4989302 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.51 | 36.0 | 2.56e-01 | 74.6% | 59.0% |
| 4043495 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 3.38e-01 | 98.6% | 51.5% |
D2
high
residues 101-201
Domain cluster:
rep: IMGVR_UViG_3300003830_000837-3300003830-Ga0051980_1000007464__D2-129
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 34.0 | 3.42e-01 | 88.1% | 45.1% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.69 | 37.0 | 4.58e-01 | 82.2% | 84.1% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.64 | 34.0 | 4.03e-01 | 83.2% | 77.3% |
| 7u7nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 33.0 | 3.44e-01 | 88.1% | 53.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 40.0 | 4.46e-01 | 100.0% | 93.4% |
| 1r0uA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 45.0 | 4.06e-01 | 84.2% | 91.5% |
| 2irmA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 44.0 | 3.11e-01 | 83.2% | 95.9% |
| 7q61A01 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 34.0 | 3.34e-01 | 84.2% | 55.0% |
| 1n26A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 32.0 | 3.14e-01 | 83.2% | 51.4% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.56 | 39.0 | 3.31e-01 | 72.3% | 95.8% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 37.0 | 4.12e-01 | 100.0% | 92.1% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 32.0 | 2.89e-01 | 85.1% | 40.3% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 31.0 | 3.26e-01 | 84.2% | 60.0% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.53 | 41.0 | 4.43e-01 | 91.1% | 98.8% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.53 | 37.0 | 3.86e-01 | 72.3% | 100.0% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.53 | 36.0 | 3.76e-01 | 70.3% | 98.9% |
| 7bi2A02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 38.0 | 3.54e-01 | 80.2% | 90.9% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.79 | 41.0 | 5.37e-01 | 82.2% | 92.7% |
| 199962 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.69 | 37.0 | 4.58e-01 | 82.2% | 84.1% |
| 4962335 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.68 | 37.0 | 4.48e-01 | 82.2% | 81.5% |
| 3760983 | 3335.1.1.3 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C | 0.63 | 48.0 | 4.86e-01 | 80.2% | 100.0% |
| 4032409 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 38.0 | 4.35e-01 | 81.2% | 85.3% |
| 4102071 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.61 | 35.0 | 3.03e-01 | 82.2% | 38.0% |
| 4305531 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.60 | 35.0 | 3.01e-01 | 82.2% | 36.8% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.60 | 39.0 | 3.88e-01 | 100.0% | 62.9% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 38.0 | 4.24e-01 | 100.0% | 95.7% |
| 3968768 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 40.0 | 4.48e-01 | 88.1% | 96.0% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.57 | 34.0 | 4.12e-01 | 84.2% | 98.3% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.57 | 34.0 | 4.05e-01 | 84.2% | 98.3% |
| 3989353 | 9.9.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 | 0.57 | 43.0 | 4.09e-01 | 82.2% | 100.0% |
| 3971638 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 32.0 | 3.13e-01 | 81.2% | 48.7% |
| 4960838 | 11.14.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › AglB_L1 | 0.57 | 33.0 | 3.49e-01 | 82.2% | 63.3% |
| 4059006 | 9.9.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB | 0.57 | 43.0 | 4.02e-01 | 81.2% | 100.0% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 38.0 | 4.18e-01 | 100.0% | 93.3% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 34.0 | 3.98e-01 | 85.1% | 95.2% |
| 4301927 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.56 | 43.0 | 3.39e-01 | 84.2% | 89.5% |
| 3598842 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 34.0 | 2.96e-01 | 82.2% | 41.3% |
| 3637444 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.55 | 41.0 | 3.14e-01 | 81.2% | 57.6% |
| 3666673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 34.0 | 3.75e-01 | 83.2% | 84.0% |
| 3929515 | 382.1.1.21 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF28966 | 0.53 | 35.0 | 3.55e-01 | 82.2% | 64.8% |
| 3927969 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.53 | 35.0 | 3.07e-01 | 82.2% | 43.2% |
| 4065108 | 284.3.1.1 ↗ | a+b two layers › FKBP-like › Colicin E3 immunity protein › Colicin E3 immunity protein › Cloacin_immun | 0.53 | 41.0 | 4.43e-01 | 88.1% | 98.8% |
| 3601389 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 2.91e-01 | 82.2% | 35.5% |
| 3994984 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.53 | 33.0 | 3.85e-01 | 84.2% | 96.9% |
| 3395915 | 302.1.1.3 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › PF29551 | 0.52 | 37.0 | 3.15e-01 | 85.1% | 42.9% |
| 3726088 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.52 | 38.0 | 3.29e-01 | 88.1% | 48.1% |
| 3396396 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.52 | 32.0 | 2.53e-01 | 84.2% | 27.9% |