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NC_071041.1__YP_010679574.1__PQE67_gp159__00145

Bact-Vir

NC_071041.1__YP_010679574.1__PQE67_gp159__00145

Identity

Accession:
NC_071041 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirovvirus› Bacillus_phage_Kirov

TaxID: 2783539

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-57
PDB
Domain cluster: rep: MN988534.1__QIG73864.1__EVC06_089__00089__D3-62
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.84 61.0 5.14e-01 79.6% 48.2%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.81 56.0 5.15e-01 77.8% 56.3%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.79 55.0 5.12e-01 79.6% 59.1%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.77 68.0 6.32e-01 98.1% 85.1%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.76 66.0 5.80e-01 100.0% 73.2%
1gd8A00 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.75 66.0 5.32e-01 100.0% 93.3%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.74 65.0 5.90e-01 100.0% 80.8%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.73 57.0 4.68e-01 85.2% 57.3%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 60.0 5.37e-01 96.3% 74.4%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.71 60.0 5.63e-01 100.0% 82.9%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 51.0 4.49e-01 77.8% 54.3%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 59.0 4.66e-01 96.3% 64.9%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.70 54.0 4.83e-01 85.2% 66.2%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.70 59.0 5.34e-01 100.0% 76.9%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 60.0 5.03e-01 100.0% 76.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.69 58.0 5.34e-01 100.0% 78.7%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 47.0 4.35e-01 74.1% 63.0%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 59.0 4.70e-01 100.0% 70.3%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 48.0 4.21e-01 77.8% 63.2%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 53.0 4.17e-01 87.0% 44.3%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.67 57.0 4.82e-01 100.0% 62.8%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.67 58.0 4.35e-01 98.1% 77.6%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 57.0 3.88e-01 100.0% 76.7%
2p5vA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.66 47.0 4.08e-01 79.6% 48.8%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 56.0 4.03e-01 100.0% 36.4%
2mobA00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.65 47.0 4.02e-01 79.6% 47.9%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.65 52.0 4.83e-01 92.6% 87.3%
1rkiA01 3.30.70.1650 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif 0.65 47.0 3.95e-01 79.6% 47.4%
4ae5C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 46.0 3.40e-01 77.8% 32.3%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.65 45.0 4.12e-01 75.9% 57.1%
1utaA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.64 44.0 4.04e-01 77.8% 51.9%
2b30A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.64 53.0 4.32e-01 96.3% 82.6%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 4.78e-01 100.0% 76.7%
5o5cB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 46.0 3.59e-01 79.6% 47.7%
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.64 46.0 3.12e-01 79.6% 31.1%
3dnpA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.64 54.0 4.27e-01 96.3% 91.2%
3ocjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 54.0 3.43e-01 100.0% 33.3%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.76e-01 100.0% 95.1%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.64 56.0 4.07e-01 98.1% 80.8%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 49.0 4.47e-01 85.2% 75.3%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 3.85e-01 77.8% 49.5%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 53.0 3.71e-01 100.0% 36.7%
3kdgA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.63 42.0 3.62e-01 77.8% 40.4%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 4.21e-01 81.5% 59.2%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 53.0 4.09e-01 98.1% 78.6%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.63 46.0 4.35e-01 81.5% 69.1%
4qbuA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 45.0 4.28e-01 77.8% 63.6%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.75e-01 100.0% 88.0%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.63 53.0 4.38e-01 100.0% 75.7%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.62 51.0 4.18e-01 100.0% 50.4%
2amyA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.62 52.0 4.29e-01 96.3% 83.3%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 45.0 3.37e-01 81.5% 30.6%
2hf2B02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.62 52.0 4.20e-01 96.3% 82.2%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.62 53.0 4.33e-01 100.0% 89.6%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 50.0 3.66e-01 100.0% 33.7%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 52.0 4.27e-01 100.0% 84.1%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 51.0 4.53e-01 100.0% 81.6%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.46e-01 100.0% 72.4%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 43.0 3.56e-01 77.8% 41.7%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.61 46.0 3.89e-01 85.2% 55.8%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.60 52.0 4.24e-01 100.0% 84.9%
4durB01 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.60 43.0 3.82e-01 77.8% 51.9%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.51e-01 100.0% 69.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.16e-01 100.0% 61.0%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 49.0 4.50e-01 98.1% 70.7%
4bndA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.59 48.0 4.18e-01 100.0% 78.1%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.59 47.0 4.01e-01 96.3% 86.1%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.58 49.0 3.82e-01 100.0% 57.9%
2diuA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 40.0 3.72e-01 75.9% 54.8%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 46.0 3.93e-01 92.6% 53.6%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 3.95e-01 90.7% 61.8%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 4.04e-01 88.9% 65.7%
1akoA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.58 47.0 3.11e-01 100.0% 21.3%
3l7yA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.56 46.0 3.87e-01 100.0% 84.4%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 42.0 3.64e-01 85.2% 55.9%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.56 42.0 3.83e-01 83.3% 98.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.87e-01 100.0% 63.8%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 39.0 3.38e-01 79.6% 47.5%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 44.0 3.61e-01 92.6% 55.0%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.60e-01 100.0% 48.8%
2qmaA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 43.0 3.40e-01 92.6% 44.8%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.54 46.0 3.34e-01 100.0% 80.7%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 40.0 3.03e-01 85.2% 59.2%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.53 43.0 3.71e-01 100.0% 88.1%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.53 37.0 2.99e-01 77.8% 34.1%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 43.0 3.39e-01 100.0% 91.8%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.78e-01 96.3% 88.7%
2zbcA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.52 37.0 3.46e-01 79.6% 69.9%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 3.56e-01 94.4% 82.7%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 35.0 2.88e-01 77.8% 58.7%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4976695 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.80 55.0 4.61e-01 79.6% 43.3%
4995776 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 6.28e-01 100.0% 75.7%
4987642 304.8.1.10 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.78 57.0 4.36e-01 79.6% 35.0%
5010185 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.78 69.0 6.33e-01 100.0% 78.6%
4940198 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 70.0 5.33e-01 100.0% 46.7%
4993130 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 56.0 5.02e-01 77.8% 61.3%
4981701 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.76 68.0 6.41e-01 100.0% 87.7%
4992653 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 65.0 5.93e-01 94.4% 72.9%
5075143 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 64.0 4.31e-01 96.3% 26.8%
4948443 304.8.1.10 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.75 54.0 3.94e-01 79.6% 28.0%
3877589 327.16.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.74 55.0 5.34e-01 79.6% 73.3%
5028058 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 4.65e-01 90.7% 40.8%
5028300 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 63.0 5.38e-01 96.3% 60.0%
3603717 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 65.0 5.70e-01 100.0% 71.2%
5065094 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 61.0 4.69e-01 94.4% 50.4%
3602137 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 63.0 5.28e-01 98.1% 68.4%
3966114 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.73 61.0 5.32e-01 96.3% 64.7%
3561915 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.73 64.0 5.76e-01 100.0% 80.0%
3578641 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.73 53.0 4.85e-01 77.8% 61.4%
4200948 242.1.1.2 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.72 61.0 4.98e-01 94.4% 62.0%
5029252 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.72 65.0 4.97e-01 100.0% 67.5%
4029151 320.2.1.0 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain 0.72 61.0 6.01e-01 100.0% 95.0%
5067550 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 55.0 4.49e-01 85.2% 43.8%
4989805 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.72 62.0 5.78e-01 100.0% 78.6%
4978474 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.71 61.0 4.56e-01 96.3% 40.7%
5007423 2.1.1.95 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C 0.71 51.0 3.92e-01 75.9% 32.8%
3740807 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.71 62.0 5.39e-01 100.0% 68.2%
4105291 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.71 60.0 5.71e-01 100.0% 89.2%
3410614 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 60.0 4.92e-01 100.0% 58.1%
3357930 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.70 61.0 5.56e-01 100.0% 78.7%
4003644 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.70 51.0 3.56e-01 77.8% 24.0%
5058967 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 50.0 4.57e-01 81.5% 56.0%
3250910 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.70 61.0 5.66e-01 100.0% 84.3%
4474140 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.70 58.0 5.57e-01 100.0% 87.7%
5023542 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 58.0 5.23e-01 96.3% 68.0%
3737998 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 57.0 5.08e-01 100.0% 74.1%
3080497 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.69 57.0 5.46e-01 100.0% 85.1%
4126441 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.69 57.0 5.64e-01 100.0% 96.7%
3871908 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.69 58.0 4.70e-01 100.0% 58.4%
5023543 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 59.0 4.88e-01 98.1% 72.0%
3206066 327.19.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain 0.69 49.0 3.95e-01 77.8% 38.2%
4393799 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.69 57.0 5.35e-01 100.0% 81.4%
4228350 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.68 58.0 5.55e-01 100.0% 92.3%
3737985 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.68 58.0 4.86e-01 100.0% 58.0%
4012905 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 56.0 5.02e-01 100.0% 67.1%
3218484 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.68 57.0 5.37e-01 100.0% 84.3%
3198781 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.68 57.0 5.02e-01 100.0% 69.4%
4608678 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 56.0 5.10e-01 100.0% 77.5%
1434556 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.68 56.0 5.34e-01 100.0% 86.4%
4947398 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 49.0 4.48e-01 79.6% 57.3%
3190610 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.67 56.0 4.62e-01 100.0% 69.1%
3711102 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.67 57.0 4.75e-01 100.0% 58.0%
4027647 3122.1.1.0 ↗ a+b complex topology › MESD › MESD › MESD 0.67 47.0 3.76e-01 75.9% 53.9%
5041003 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 48.0 4.35e-01 79.6% 55.1%
3780948 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 57.0 4.75e-01 100.0% 60.0%
3457072 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 57.0 4.29e-01 100.0% 56.4%
3710687 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 55.0 5.04e-01 98.1% 78.7%
4012898 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 56.0 4.69e-01 100.0% 59.0%
4938255 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 57.0 5.07e-01 100.0% 68.8%
3206206 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 56.0 5.15e-01 100.0% 97.3%
3879109 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 55.0 4.60e-01 100.0% 56.7%
4523483 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.66 48.0 4.37e-01 79.6% 57.3%
3596513 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 55.0 4.76e-01 100.0% 63.3%
3785289 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.65 54.0 5.20e-01 100.0% 92.3%
3321720 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 56.0 4.52e-01 100.0% 56.4%
4929421 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.65 47.0 4.17e-01 79.6% 51.2%
3916427 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 50.0 3.78e-01 85.2% 65.9%
3596989 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.65 45.0 4.08e-01 75.9% 55.0%
4365938 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 53.0 4.75e-01 100.0% 65.9%
3581967 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 55.0 5.29e-01 100.0% 89.2%
3308590 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 54.0 4.56e-01 100.0% 62.0%
3609452 304.24.1.3 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.64 45.0 4.05e-01 75.9% 55.0%
3262749 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 51.0 4.38e-01 100.0% 63.8%
4027427 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.64 45.0 4.14e-01 75.9% 58.7%
3950275 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.64 52.0 4.57e-01 94.4% 74.1%
4034313 3012.1.1.4 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.64 54.0 4.37e-01 98.1% 87.3%
3595328 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 52.0 4.38e-01 100.0% 53.3%
4647806 327.19.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.64 43.0 3.62e-01 77.8% 40.0%
3721862 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 53.0 4.46e-01 100.0% 94.0%
3804288 2006.1.1.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.63 54.0 3.42e-01 98.1% 21.4%
3624653 304.163.1.1 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.62 46.0 4.21e-01 83.3% 68.0%
5061295 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.60 44.0 4.05e-01 79.6% 57.3%
3801947 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.60 44.0 3.55e-01 77.8% 43.8%
4934080 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 50.0 3.77e-01 100.0% 80.7%
3598887 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 41.0 3.82e-01 77.8% 54.7%
4025551 304.24.1.3 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.59 44.0 3.75e-01 90.7% 47.4%
5074547 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 42.0 3.82e-01 79.6% 65.0%
5049483 327.19.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.59 39.0 3.43e-01 77.8% 42.2%
2076029 3012.1.1.4 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.59 47.0 3.99e-01 96.3% 85.3%
1910394 101.1.2.164 ↗ alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 0.58 50.0 4.79e-01 100.0% 89.2%
3601388 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.58 42.0 3.88e-01 94.4% 58.7%
3988398 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.57 44.0 3.78e-01 87.0% 55.8%
5000514 304.19.1.1 ↗ a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.57 40.0 3.55e-01 77.8% 50.0%
4981719 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.57 38.0 3.73e-01 79.6% 60.0%
5035705 304.57.1.0 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.56 47.0 4.08e-01 94.4% 63.5%
5068007 327.19.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.56 38.0 3.38e-01 75.9% 44.4%
3795358 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 38.0 3.59e-01 77.8% 54.7%