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NC_071042.1__YP_010679754.1__PQE68_gp050__00050

Bact-Vir

NC_071042.1__YP_010679754.1__PQE68_gp050__00050

Identity

Accession:
NC_071042 ↗
Kingdom:
phage

Quality

90.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sophritavirus› Bacillus_phage_vB_BanS_Sophrita

TaxID: 2894790

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-91
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.67 60.0 4.64e-01 100.0% 92.2%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.66 58.0 4.50e-01 97.5% 89.8%
3v8uA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.66 58.0 5.65e-01 97.5% 93.3%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 59.0 4.69e-01 97.5% 91.7%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.65 59.0 4.65e-01 100.0% 87.3%
4qq1C03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.64 56.0 5.51e-01 96.3% 92.0%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.62 43.0 4.12e-01 85.2% 62.8%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 55.0 4.48e-01 100.0% 95.3%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 55.0 3.87e-01 98.8% 89.6%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 42.0 3.75e-01 97.5% 52.2%
2oafB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 43.0 3.50e-01 100.0% 42.4%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.59 40.0 2.79e-01 100.0% 21.3%
4l3rA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.20e-01 95.1% 93.0%
5byuA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 42.0 3.62e-01 98.8% 47.7%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 53.0 4.14e-01 97.5% 79.5%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 53.0 4.08e-01 98.8% 80.2%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 4.12e-01 98.8% 81.1%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.58 49.0 4.62e-01 96.3% 97.1%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 50.0 4.10e-01 97.5% 68.6%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 50.0 4.20e-01 96.3% 82.0%
2xepB02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 51.0 3.61e-01 98.8% 88.3%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.58 52.0 4.04e-01 98.8% 78.2%
3so6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 4.19e-01 96.3% 74.5%
2o3bB00 3.40.1460.10 Alpha Beta › 3-Layer(aba) Sandwich › Nuia › Nuclease A inhibitor-like 0.58 49.0 4.26e-01 98.8% 88.9%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 4.14e-01 96.3% 76.1%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.57 51.0 3.15e-01 96.3% 98.6%
3v7dD02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 50.0 3.25e-01 95.1% 99.7%
1p5dX04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.57 39.0 3.77e-01 81.5% 62.4%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 47.0 4.25e-01 90.1% 88.9%
2z0fA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.57 43.0 4.01e-01 81.5% 69.6%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 4.17e-01 95.1% 96.8%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 48.0 4.04e-01 93.8% 60.0%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.17e-01 95.1% 73.8%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 4.06e-01 96.3% 95.5%
1yq2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.49e-01 96.3% 53.0%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 4.00e-01 98.8% 92.2%
3hm0A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 40.0 3.50e-01 77.8% 81.0%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 4.06e-01 100.0% 93.3%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 45.0 3.95e-01 95.1% 96.9%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 46.0 3.85e-01 100.0% 90.7%
3cjyA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.52 40.0 2.83e-01 81.5% 68.8%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 39.0 3.16e-01 97.5% 42.2%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 37.0 3.26e-01 75.3% 76.2%
3qooA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 41.0 3.49e-01 85.2% 76.9%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.51 43.0 2.94e-01 93.8% 49.8%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 45.0 3.96e-01 96.3% 70.6%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 39.0 3.86e-01 93.8% 77.9%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 44.0 3.89e-01 96.3% 70.6%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 44.0 3.76e-01 96.3% 65.4%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.50 38.0 3.24e-01 84.0% 79.9%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965335 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.67 61.0 4.40e-01 100.0% 82.2%
1309122 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.67 60.0 4.66e-01 100.0% 93.2%
3574392 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 58.0 5.07e-01 97.5% 75.0%
3636874 220.1.1.69 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 0.63 55.0 4.59e-01 97.5% 86.4%
3285421 9.14.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W 0.61 53.0 4.45e-01 100.0% 83.4%
142730 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.60 41.0 3.68e-01 96.3% 51.9%
3842596 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 53.0 3.36e-01 96.3% 97.7%
3569201 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 51.0 3.29e-01 96.3% 98.4%
5055408 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.58 44.0 4.33e-01 82.7% 100.0%
3991137 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.58 51.0 3.38e-01 98.8% 89.4%
3742330 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.57 50.0 4.40e-01 97.5% 67.0%
3948528 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 49.0 4.39e-01 96.3% 93.6%
4299014 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.55 43.0 3.44e-01 84.0% 91.6%
3602410 604.1.1.235 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27233 0.55 49.0 3.43e-01 100.0% 55.4%
3781119 5.1.4.97 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.54 48.0 3.02e-01 98.8% 86.0%
3706310 331.19.1.0 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.54 46.0 4.24e-01 93.8% 81.9%
5029530 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.53 48.0 3.63e-01 97.5% 78.4%
4926979 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 47.0 4.13e-01 95.1% 73.9%
3924796 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.53 47.0 4.12e-01 95.1% 67.0%
4945423 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 46.0 4.22e-01 95.1% 74.3%
4928935 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 46.0 4.30e-01 95.1% 86.0%
3619467 220.1.1.84 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.52 45.0 4.12e-01 96.3% 79.1%
4929825 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.95e-01 93.8% 70.6%
3737927 220.1.1.294 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.52 41.0 3.78e-01 96.3% 64.5%
5078870 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 45.0 3.75e-01 95.1% 60.0%
4991121 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 4.01e-01 95.1% 73.0%
3813180 210.1.4.1 ↗ a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 0.52 45.0 2.99e-01 100.0% 90.5%
5052941 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 45.0 3.82e-01 95.1% 72.3%
3283568 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 45.0 3.85e-01 95.1% 68.0%
4972031 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 45.0 3.80e-01 96.3% 70.4%
3928706 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.51 45.0 3.62e-01 100.0% 64.8%
5000374 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 45.0 3.70e-01 95.1% 67.1%
5078530 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 43.0 3.95e-01 93.8% 70.5%
3243753 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.51 43.0 3.62e-01 93.8% 62.9%
5073914 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 44.0 3.77e-01 93.8% 63.2%
4940035 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 41.0 3.72e-01 93.8% 64.5%
5071765 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 43.0 3.72e-01 92.6% 60.8%
4975639 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 44.0 3.78e-01 96.3% 65.4%
4966092 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 40.0 3.52e-01 86.4% 71.0%
4440297 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 44.0 3.68e-01 96.3% 62.1%
5063840 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 44.0 3.82e-01 95.1% 66.7%
4929367 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 43.0 3.82e-01 96.3% 98.3%
5049691 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 43.0 4.00e-01 93.8% 75.0%
3255173 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.50 42.0 3.83e-01 97.5% 67.0%
5050426 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.50 44.0 3.89e-01 96.3% 70.3%
4977806 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 43.0 3.66e-01 93.8% 58.5%
5041753 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.50 44.0 3.89e-01 96.3% 73.9%
5050773 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 45.0 3.64e-01 100.0% 100.0%