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NC_071042.1__YP_010679832.1__PQE68_gp128__00128
Bact-VirNC_071042.1__YP_010679832.1__PQE68_gp128__00128
Identity
- Accession:
- NC_071042 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 2894790
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-72
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.67 | 41.0 | 4.09e-01 | 100.0% | 58.1% |
| 3cngA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.67 | 39.0 | 4.50e-01 | 96.6% | 97.1% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.63 | 40.0 | 4.00e-01 | 100.0% | 61.3% |
| 1pm3A00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.60 | 41.0 | 3.90e-01 | 98.3% | 59.4% |
| 2kxqA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.59 | 30.0 | 3.63e-01 | 96.6% | 86.7% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 38.0 | 3.67e-01 | 94.8% | 65.2% |
| 3jbtA06 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 36.0 | 2.29e-01 | 74.1% | 26.9% |
| 2kjxA01 | 3.30.720.220 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.50 | 32.0 | 3.29e-01 | 93.1% | 69.8% |
| 4eqsA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 34.0 | 2.53e-01 | 72.4% | 40.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398775 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.68 | 43.0 | 4.83e-01 | 98.3% | 92.5% |
| 3995563 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.68 | 43.0 | 4.54e-01 | 98.3% | 74.0% |
| 5028776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 43.0 | 4.54e-01 | 98.3% | 74.0% |
| 4929724 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 41.0 | 4.51e-01 | 96.6% | 77.8% |
| 3218547 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.68 | 36.0 | 4.02e-01 | 77.6% | 64.4% |
| 5033134 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 46.0 | 5.04e-01 | 100.0% | 95.6% |
| 3486811 | 377.1.1.83 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 | 0.66 | 39.0 | 4.56e-01 | 96.6% | 97.1% |
| 4941366 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 40.0 | 4.61e-01 | 98.3% | 90.0% |
| 4929592 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 41.0 | 4.72e-01 | 100.0% | 97.4% |
| 3426675 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.63 | 35.0 | 3.57e-01 | 96.6% | 54.2% |
| 3358110 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 43.0 | 4.73e-01 | 100.0% | 93.3% |
| 4984918 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 38.0 | 4.30e-01 | 98.3% | 100.0% |
| 5081496 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 37.0 | 4.26e-01 | 98.3% | 87.5% |
| 4959386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 37.0 | 3.93e-01 | 98.3% | 74.0% |
| 5077629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 38.0 | 4.06e-01 | 100.0% | 84.4% |
| 3835809 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.54 | 35.0 | 3.83e-01 | 100.0% | 95.0% |
| 4554479 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.53 | 44.0 | 3.97e-01 | 100.0% | 67.5% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 33.0 | 3.09e-01 | 96.6% | 51.4% |
| 3623810 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 37.0 | 3.30e-01 | 77.6% | 98.9% |
| 5070992 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.53 | 34.0 | 3.42e-01 | 100.0% | 63.3% |
| 3863246 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.52 | 30.0 | 2.66e-01 | 96.6% | 32.6% |
| 3781077 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 45.0 | 3.76e-01 | 100.0% | 72.8% |
| 3718984 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.51 | 42.0 | 4.05e-01 | 100.0% | 80.0% |