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NC_071044.1__YP_010680298.1__PQE70_gp160__00160

Bact-Vir

NC_071044.1__YP_010680298.1__PQE70_gp160__00160

Identity

Accession:
NC_071044 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Natevirus› Bacillus_phage_vB_BanS_Nate

TaxID: 2894788

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-89
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 49.0 5.30e-01 100.0% 71.2%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.80 54.0 5.88e-01 100.0% 84.1%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 46.0 5.79e-01 96.4% 98.0%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.78 46.0 5.55e-01 98.8% 90.7%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 52.0 5.45e-01 100.0% 76.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 45.0 5.07e-01 97.6% 78.1%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 48.0 4.88e-01 98.8% 67.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 46.0 5.46e-01 97.6% 94.7%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 48.0 5.61e-01 92.9% 94.9%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 41.0 5.16e-01 89.3% 100.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 44.0 4.75e-01 97.6% 71.8%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 43.0 4.70e-01 98.8% 72.5%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 40.0 4.88e-01 92.9% 88.5%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 48.0 5.41e-01 94.0% 90.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 39.0 4.85e-01 95.2% 93.8%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 47.0 4.92e-01 94.0% 73.4%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 44.0 5.04e-01 97.6% 89.8%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 47.0 4.20e-01 94.0% 49.6%
2aj2A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.69 48.0 4.61e-01 100.0% 62.9%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 46.0 5.08e-01 95.2% 89.4%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 5.02e-01 98.8% 71.7%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 4.91e-01 96.4% 82.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 48.0 5.21e-01 100.0% 95.5%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.01e-01 100.0% 81.0%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 48.0 5.20e-01 100.0% 93.1%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 42.0 4.75e-01 97.6% 95.0%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.62 57.0 4.35e-01 100.0% 78.2%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 43.0 3.48e-01 72.6% 81.4%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 52.0 4.75e-01 95.2% 76.6%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 52.0 3.88e-01 100.0% 37.4%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.60 53.0 4.13e-01 96.4% 81.1%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.36e-01 96.4% 90.9%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 4.43e-01 95.2% 78.0%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 40.0 3.55e-01 73.8% 100.0%
3oisB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 49.0 3.50e-01 100.0% 35.2%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.36e-01 95.2% 85.2%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.55 46.0 4.25e-01 95.2% 77.0%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 44.0 3.99e-01 86.9% 77.4%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.55 44.0 4.21e-01 89.3% 76.5%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 48.0 4.59e-01 98.8% 85.4%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 36.0 3.96e-01 91.7% 95.2%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 43.0 4.06e-01 86.9% 80.2%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.97e-01 98.8% 98.5%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.52 42.0 3.72e-01 88.1% 75.4%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.52 45.0 4.14e-01 98.8% 99.1%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 45.0 4.34e-01 100.0% 98.9%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.78e-01 90.5% 27.3%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 51.0 6.12e-01 97.6% 94.5%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.77 48.0 5.21e-01 100.0% 75.7%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.77 51.0 4.04e-01 70.2% 35.6%
4284118 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.57e-01 97.6% 80.0%
3517651 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.63e-01 100.0% 81.3%
3511277 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 55.0 5.66e-01 100.0% 80.0%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 48.0 5.35e-01 100.0% 84.6%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.74 49.0 5.24e-01 98.8% 78.1%
3589606 4.1.1.109 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_13 0.74 55.0 6.05e-01 100.0% 94.3%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.73 48.0 5.64e-01 98.8% 95.0%
3616007 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.73 47.0 5.64e-01 98.8% 100.0%
3955235 4.1.1.183 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4926 0.73 52.0 5.34e-01 100.0% 77.5%
3930014 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 50.0 3.98e-01 94.0% 36.9%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.73 49.0 5.69e-01 100.0% 96.7%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 47.0 3.65e-01 100.0% 31.4%
3598285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 50.0 5.43e-01 100.0% 85.7%
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 49.0 5.53e-01 100.0% 92.3%
3240651 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 47.0 4.81e-01 94.0% 70.0%
3929373 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.71 49.0 5.67e-01 100.0% 100.0%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 46.0 5.36e-01 98.8% 95.0%
3363448 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.70 54.0 5.40e-01 100.0% 80.0%
3922426 4.1.1.363 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.70 48.0 4.20e-01 100.0% 49.2%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 47.0 5.14e-01 100.0% 84.3%
3479037 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 48.0 4.90e-01 95.2% 73.8%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 46.0 5.19e-01 100.0% 89.2%
4367301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 42.0 4.88e-01 94.0% 90.9%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.69 49.0 5.28e-01 100.0% 88.6%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 47.0 5.07e-01 100.0% 84.3%
3514556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 46.0 5.01e-01 100.0% 84.3%
3964560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 5.28e-01 98.8% 90.0%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 4.28e-01 100.0% 53.3%
3225816 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 50.0 5.41e-01 94.0% 94.3%
3278853 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 5.30e-01 98.8% 96.9%
4117297 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 49.0 5.33e-01 98.8% 94.3%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 45.0 5.07e-01 98.8% 92.3%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 3.59e-01 96.4% 32.5%
3342793 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 52.0 3.96e-01 100.0% 37.9%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 5.15e-01 98.8% 96.9%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.16e-01 100.0% 84.7%
3958145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 5.21e-01 98.8% 100.0%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 50.0 5.07e-01 100.0% 83.5%
3710007 4.1.1.372 ↗ beta barrels › SH3 › SH3 › SH3 › PF30207 0.64 54.0 4.78e-01 100.0% 64.2%
4947695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 5.36e-01 98.8% 96.0%
3693741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 47.0 5.09e-01 94.0% 94.2%
3592525 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.83e-01 98.8% 69.1%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 47.0 3.85e-01 100.0% 44.0%
3974170 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.68e-01 100.0% 71.0%
3576443 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 47.0 5.06e-01 94.0% 94.3%
3357239 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.62 55.0 4.37e-01 100.0% 50.0%
4044420 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.62 57.0 4.40e-01 98.8% 80.6%
677 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.62 57.0 4.32e-01 100.0% 76.2%
3759446 4.1.1.73 ↗ beta barrels › SH3 › SH3 › SH3 › Cul7 0.62 51.0 5.05e-01 100.0% 82.2%
4620685 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.62 57.0 4.39e-01 100.0% 78.9%
4210485 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 40.0 4.50e-01 100.0% 86.2%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.62 54.0 5.52e-01 98.8% 97.5%
4582494 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.62 56.0 4.36e-01 100.0% 80.0%
3947173 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.62 55.0 4.23e-01 97.6% 80.5%
4105718 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.62 55.0 4.20e-01 97.6% 80.5%
4639593 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.61 54.0 4.19e-01 96.4% 84.4%
4281661 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.61 54.0 4.20e-01 95.2% 82.9%
4451786 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.61 55.0 4.24e-01 98.8% 81.1%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.61 53.0 4.59e-01 100.0% 63.2%
3611491 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.60 55.0 4.12e-01 98.8% 80.0%
3425872 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.60 52.0 5.15e-01 98.8% 87.8%
3332609 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.60 51.0 4.40e-01 96.4% 60.8%
4481025 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.60 54.0 4.15e-01 98.8% 79.3%
4217839 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.60 53.0 4.13e-01 97.6% 80.0%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 52.0 5.10e-01 100.0% 87.8%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.74e-01 96.4% 92.9%
None — 0.59 55.0 3.46e-01 100.0% 21.3%
3339162 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.59 48.0 4.08e-01 100.0% 55.4%
3638300 220.1.1.95 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.59 51.0 4.31e-01 96.4% 61.4%
3668420 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 54.0 4.07e-01 100.0% 65.3%
3385654 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 53.0 4.64e-01 97.6% 95.8%
3669214 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 53.0 4.57e-01 100.0% 95.4%
3172952 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 53.0 4.08e-01 100.0% 96.7%
1746358 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 53.0 4.83e-01 100.0% 99.1%
3023952 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 53.0 4.77e-01 100.0% 77.9%
4347063 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.57 53.0 4.45e-01 100.0% 74.1%
2726885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 53.0 4.73e-01 100.0% 74.3%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.56 52.0 4.31e-01 100.0% 61.4%
4101587 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.56 51.0 4.74e-01 100.0% 95.2%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 48.0 4.60e-01 100.0% 84.0%
5039728 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 40.0 2.99e-01 82.1% 62.5%
3959465 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.53 48.0 4.13e-01 100.0% 66.9%