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NC_071046.1__YP_010680859.1__PQE72_gp066__00199
Bact-VirNC_071046.1__YP_010680859.1__PQE72_gp066__00199
Identity
- Accession:
- NC_071046 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Taxonomy
TaxID: 2894789
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-81
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 32.0 | 4.12e-01 | 70.4% | 79.5% |
| 4u7bA01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.68 | 40.0 | 4.89e-01 | 75.3% | 94.1% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 44.0 | 4.48e-01 | 88.9% | 70.5% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 40.0 | 4.35e-01 | 74.1% | 74.2% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 33.0 | 4.04e-01 | 75.3% | 80.4% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.63 | 39.0 | 4.27e-01 | 80.2% | 80.6% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.62 | 42.0 | 4.15e-01 | 100.0% | 65.2% |
| 1o82A00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.56 | 35.0 | 3.75e-01 | 98.8% | 74.3% |
| 7z0sF01 | 3.30.70.3270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 40.0 | 3.21e-01 | 79.0% | 72.0% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 34.0 | 4.18e-01 | 74.1% | 98.1% |
| 3b0pA02 | 1.20.120.1460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 35.0 | 3.70e-01 | 86.4% | 74.7% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.53 | 36.0 | 3.56e-01 | 85.2% | 65.5% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 39.0 | 3.41e-01 | 95.1% | 52.9% |
| 1pbwB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.51 | 43.0 | 3.38e-01 | 98.8% | 96.9% |
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.51 | 43.0 | 3.50e-01 | 100.0% | 91.6% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219554 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.72 | 37.0 | 4.67e-01 | 79.0% | 82.0% |
| 4189523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 39.0 | 5.16e-01 | 93.8% | 97.8% |
| 5052346 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 42.0 | 4.88e-01 | 79.0% | 81.7% |
| 4929680 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 37.0 | 4.28e-01 | 93.8% | 70.0% |
| 5021144 | 101.1.1.545 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 | 0.69 | 45.0 | 5.18e-01 | 77.8% | 98.2% |
| 3522325 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.68 | 39.0 | 4.30e-01 | 98.8% | 70.8% |
| 3928087 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.67 | 40.0 | 4.31e-01 | 85.2% | 70.0% |
| 3239215 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.66 | 51.0 | 4.67e-01 | 82.7% | 97.1% |
| 2876662 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.66 | 47.0 | 4.15e-01 | 75.3% | 87.4% |
| 4949368 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 43.0 | 5.08e-01 | 77.8% | 98.2% |
| 5004578 | 101.1.1.545 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 | 0.65 | 45.0 | 4.99e-01 | 74.1% | 96.7% |
| 3184342 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 38.0 | 4.34e-01 | 72.8% | 80.0% |
| 5077614 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.63 | 37.0 | 3.89e-01 | 75.3% | 64.0% |
| 3987728 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.62 | 41.0 | 3.46e-01 | 95.1% | 40.7% |
| 4839189 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 49.0 | 4.29e-01 | 86.4% | 66.4% |
| 5061313 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.61 | 44.0 | 3.83e-01 | 76.5% | 70.4% |
| 3403079 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.60 | 51.0 | 4.56e-01 | 91.4% | 90.9% |
| 3936036 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.60 | 50.0 | 4.45e-01 | 91.4% | 92.2% |
| 3829115 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.59 | 39.0 | 4.24e-01 | 97.5% | 83.1% |
| 4944303 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.59 | 44.0 | 3.87e-01 | 80.2% | 72.0% |
| 5001590 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.58 | 38.0 | 4.35e-01 | 95.1% | 98.2% |
| 4927603 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.58 | 44.0 | 3.54e-01 | 84.0% | 68.8% |
| 3439843 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.58 | 39.0 | 3.90e-01 | 74.1% | 67.1% |
| 4224167 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.58 | 35.0 | 3.91e-01 | 95.1% | 80.0% |
| 3602903 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.57 | 38.0 | 4.28e-01 | 98.8% | 86.2% |
| 3340005 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.57 | 39.0 | 3.79e-01 | 96.3% | 63.6% |
| 3646321 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.57 | 49.0 | 3.22e-01 | 96.3% | 64.8% |
| 4980601 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.57 | 45.0 | 3.63e-01 | 84.0% | 66.0% |
| 3334461 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.56 | 38.0 | 4.01e-01 | 96.3% | 76.0% |
| 3603105 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 38.0 | 3.93e-01 | 98.8% | 74.7% |
| 3341091 | 101.35.1.6 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 | 0.56 | 42.0 | 4.58e-01 | 98.8% | 100.0% |
| 3787785 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 32.0 | 3.84e-01 | 75.3% | 100.0% |
| 3276782 | 509.1.1.9 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598 | 0.55 | 35.0 | 3.45e-01 | 100.0% | 57.0% |
| 5046309 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.55 | 35.0 | 3.36e-01 | 100.0% | 54.7% |
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 4.10e-01 | 100.0% | 84.3% |
| 4953416 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 35.0 | 4.06e-01 | 74.1% | 100.0% |
| 5021717 | 101.1.1.562 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF28505 | 0.53 | 46.0 | 3.98e-01 | 96.3% | 99.2% |
| 3518787 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.53 | 37.0 | 4.09e-01 | 92.6% | 92.3% |
| 3251428 | 3919.1.1.4 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMMD1_N | 0.53 | 41.0 | 3.78e-01 | 97.5% | 63.6% |
| 4984715 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.52 | 47.0 | 3.44e-01 | 98.8% | 90.1% |
| 4228013 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.52 | 41.0 | 3.55e-01 | 100.0% | 53.3% |
| 3979806 | 3822.1.1.1 ↗ | alpha complex topology › Intergenic-region protein › Intergenic-region protein › Intergenic-region protein › Antirestrict | 0.51 | 42.0 | 3.52e-01 | 92.6% | 61.1% |
| 5050738 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.54e-01 | 93.8% | 79.3% |