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NC_071048.1__YP_010681225.1__PQE74_gp082__00082
Bact-VirNC_071048.1__YP_010681225.1__PQE74_gp082__00082
Identity
- Accession:
- NC_071048 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
TaxID: 2894786
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-43
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.84 | 72.0 | 5.76e-01 | 100.0% | 91.8% |
| 1rhfA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.78 | 59.0 | 4.69e-01 | 100.0% | 41.2% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.68 | 56.0 | 4.17e-01 | 100.0% | 91.7% |
| 3ln6A01 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.67 | 57.0 | 3.30e-01 | 100.0% | 30.3% |
| 4ggmX02 | 3.40.140.80 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain | 0.65 | 53.0 | 3.73e-01 | 100.0% | 30.0% |
| 5i0dA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 56.0 | 3.92e-01 | 100.0% | 38.1% |
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.64 | 53.0 | 4.30e-01 | 100.0% | 89.8% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 52.0 | 3.88e-01 | 100.0% | 42.2% |
| 2gm2A01 | 3.40.1230.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Mth938; Chain: A, › MTH938-like | 0.59 | 49.0 | 3.61e-01 | 92.9% | 55.4% |
| 3pl5A02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.59 | 44.0 | 4.53e-01 | 100.0% | 100.0% |
| 4csqA00 | 2.30.29.190 | Mainly Beta › Roll › PH-domain like › | 0.59 | 50.0 | 3.72e-01 | 100.0% | 77.0% |
| 1vz8A02 | 3.10.20.340 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › ArgJ beta chain, C-terminal domain | 0.55 | 47.0 | 3.50e-01 | 100.0% | 83.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 41.0 | 3.60e-01 | 100.0% | 69.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4595959 | 308.1.1.0 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related | 0.79 | 66.0 | 5.47e-01 | 100.0% | 97.5% |
| 4976436 | 884.1.1.0 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain | 0.78 | 65.0 | 4.76e-01 | 97.6% | 97.5% |
| 5005349 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 49.0 | 2.81e-01 | 73.8% | 6.5% |
| 3738248 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.70 | 53.0 | 4.44e-01 | 100.0% | 48.0% |
| 4978966 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.69 | 58.0 | 3.60e-01 | 100.0% | 54.8% |
| 3423236 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 50.0 | 4.45e-01 | 95.2% | 60.0% |
| 5449 | 304.121.1.1 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like › DUF1697 | 0.64 | 53.0 | 4.22e-01 | 100.0% | 84.0% |
| 1734768 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.64 | 44.0 | 4.15e-01 | 100.0% | 56.9% |
| 1291133 | 220.6.1.1 ↗ | beta barrels › PH domain-like › Uncharacterized protein PA3793 › Uncharacterized protein PA3793 › DUF5629 | 0.59 | 50.0 | 3.72e-01 | 100.0% | 77.0% |
| 3621028 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.57 | 42.0 | 3.73e-01 | 92.9% | 50.0% |
| 3798311 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.57 | 42.0 | 3.97e-01 | 97.6% | 65.5% |
| 3422860 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 47.0 | 3.20e-01 | 100.0% | 28.0% |
| 3699220 | 284.1.1.6 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › DUF1930 | 0.51 | 43.0 | 3.70e-01 | 97.6% | 64.3% |
| 4028010 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 45.0 | 3.36e-01 | 100.0% | 46.7% |