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NC_071050.1__YP_010681839.1__PQE76_gp221__00221

Bact-Vir

NC_071050.1__YP_010681839.1__PQE76_gp221__00221

Identity

Accession:
NC_071050 ↗
Kingdom:
phage

Quality

68.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zhangjivirus› Bacillus_phage_vB_BsuS_PJN02

TaxID: 2920374

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-50
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fndA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 48.0 3.22e-01 77.6% 22.6%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.63 45.0 2.87e-01 77.6% 37.3%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.62 47.0 3.96e-01 87.8% 72.8%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 48.0 3.85e-01 91.8% 80.6%
2hi2A00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.58 42.0 3.12e-01 85.7% 79.6%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.58 40.0 3.41e-01 77.6% 70.2%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 47.0 3.77e-01 100.0% 49.1%
4kh9B02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.57 45.0 3.66e-01 98.0% 92.0%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 3.36e-01 89.8% 81.1%
1h54A03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.56 42.0 3.77e-01 87.8% 55.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.61e-01 83.7% 72.0%
3topA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 46.0 3.40e-01 100.0% 35.3%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.54 43.0 3.28e-01 93.9% 51.1%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.67e-01 100.0% 61.5%
3kflA02 2.170.220.10 Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › 0.53 37.0 2.89e-01 100.0% 31.4%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.52 43.0 4.15e-01 100.0% 82.1%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 43.0 3.32e-01 100.0% 72.9%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.51 39.0 2.89e-01 100.0% 65.2%
5is8A02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.50 41.0 2.86e-01 100.0% 75.4%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3436497 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.76 45.0 4.18e-01 98.0% 46.7%
3901454 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.68 47.0 3.10e-01 73.5% 33.3%
3953959 4.1.1.424 ↗ beta barrels › SH3 › SH3 › SH3 › PF29823 0.66 40.0 3.98e-01 87.8% 54.0%
3768845 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.65 51.0 4.01e-01 85.7% 85.7%
3282276 3735.1.1.9 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat+DUF6531 0.64 52.0 3.00e-01 93.9% 34.0%
4433750 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 38.0 2.26e-01 100.0% 7.2%
4027686 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.63 38.0 3.69e-01 87.8% 52.7%
4931928 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 42.0 3.48e-01 71.4% 62.4%
4963130 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.61 42.0 2.39e-01 87.8% 7.4%
5039400 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.60 42.0 2.63e-01 77.6% 51.3%
3905730 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.59 50.0 3.91e-01 100.0% 48.7%
5035011 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.57 48.0 3.15e-01 100.0% 60.4%
3218205 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 47.0 3.61e-01 100.0% 47.2%
3941378 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.55 44.0 3.66e-01 91.8% 78.9%
3719371 101.1.12.0 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.55 44.0 3.49e-01 100.0% 93.6%
4927153 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.55 45.0 4.37e-01 98.0% 83.6%
3838516 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.55 39.0 2.55e-01 79.6% 27.5%
3416167 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.54 46.0 3.01e-01 100.0% 72.8%
3941356 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.54 44.0 3.46e-01 100.0% 46.7%
3999358 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.53 34.0 3.22e-01 83.7% 51.7%
5058881 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 44.0 2.73e-01 100.0% 68.8%
3515855 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.53 40.0 3.30e-01 87.8% 45.0%
3407028 5.1.5.78 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, eIF2A, ANAPC4_WD40 0.53 38.0 2.38e-01 85.7% 20.8%
2501356 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 42.0 2.65e-01 100.0% 26.5%
3565027 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.51 40.0 2.53e-01 100.0% 43.2%
3957486 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.51 40.0 3.11e-01 89.8% 81.7%
3408736 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.51 34.0 2.25e-01 71.4% 31.1%
168173 4276.1.1.1 ↗ a+b two layers › XisI-like › XisI-like › XisI-like › XisI 0.51 39.0 3.30e-01 100.0% 60.6%
4050578 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.50 45.0 3.29e-01 100.0% 92.8%