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NC_071070.1__YP_010682819.1__PQE96_gp36__00036

Bact-Vir

NC_071070.1__YP_010682819.1__PQE96_gp36__00036

Identity

Accession:
NC_071070 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Brussowvirus› Streptococcus_phage_CHPC931

TaxID: 2365052

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lvlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 51.0 3.44e-01 72.6% 45.2%
2i7aA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 51.0 3.90e-01 88.7% 40.1%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.64 49.0 3.93e-01 88.7% 43.9%
1onfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 48.0 3.37e-01 82.3% 32.4%
2g5cB02 1.10.3660.10 Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain 0.63 43.0 3.53e-01 71.0% 65.5%
2z7bA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.62 51.0 3.49e-01 93.5% 70.9%
1l8qA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 43.0 4.61e-01 82.3% 98.0%
3vygE00 1.10.472.20 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit 0.55 41.0 3.12e-01 80.6% 53.6%
1v9mA03 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.54 47.0 4.09e-01 96.8% 83.3%
6ianC01 1.10.418.70 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Intraflagellar transport protein 81, N-terminal domain 0.54 42.0 3.47e-01 88.7% 74.2%
1on2A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.54 39.0 3.97e-01 80.6% 84.1%
3fixA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 40.0 3.07e-01 87.1% 86.1%
3mfiA03 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.51 37.0 3.49e-01 77.4% 68.4%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3910438 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.74 55.0 4.13e-01 79.0% 46.2%
3512559 192.1.1.37 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF7753 0.73 55.0 5.46e-01 80.6% 81.5%
3619546 3712.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 0.69 52.0 5.17e-01 79.0% 83.1%
3615878 632.1.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid 0.69 60.0 5.23e-01 98.4% 94.7%
3928724 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 51.0 4.81e-01 83.9% 65.3%
3192907 109.4.1.89 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Drf_FH3,Drf_GBD 0.67 58.0 3.59e-01 95.2% 18.0%
3639520 219.1.1.9 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 0.66 54.0 3.41e-01 91.9% 17.5%
4530108 3711.1.1.59 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › CemA 0.65 47.0 4.03e-01 88.7% 48.5%
3965599 148.1.3.49 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Hda_lid 0.64 50.0 4.82e-01 85.5% 78.6%
3785892 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.64 48.0 3.23e-01 82.3% 29.8%
3945729 604.32.1.0 ↗ alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY 0.63 55.0 4.30e-01 96.8% 100.0%
4160153 148.1.3.222 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27254 0.63 45.0 4.43e-01 82.3% 70.0%
4567957 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.63 56.0 4.58e-01 100.0% 90.4%
3343513 192.8.1.268 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CemA 0.63 45.0 3.86e-01 88.7% 46.2%
3811948 616.1.1.0 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.62 44.0 4.20e-01 72.6% 91.4%
3883930 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.62 50.0 3.27e-01 100.0% 20.8%
3264568 3748.1.1.3 ↗ extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C 0.62 47.0 3.83e-01 79.0% 93.3%
3216781 213.1.1.49 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1248 0.61 48.0 3.79e-01 85.5% 82.3%
4669270 6026.1.1.42 ↗ alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › CemA 0.61 44.0 4.05e-01 90.3% 57.6%
3612596 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.57 40.0 4.24e-01 74.2% 92.0%
4943607 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.57 51.0 3.41e-01 100.0% 98.8%
3901583 632.3.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › Suv3_C_1 0.57 41.0 4.41e-01 80.6% 98.0%
4414222 3712.1.1.13 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › CemA 0.57 42.0 4.06e-01 80.6% 78.6%
4444553 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.52 46.0 2.90e-01 98.4% 27.1%