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NC_071084.1__YP_010683468.1__PQF10_gp28__00028

Bact-Vir

NC_071084.1__YP_010683468.1__PQF10_gp28__00028

Identity

Accession:
NC_071084 ↗
Kingdom:
phage

Quality

94.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Brussowvirus› Streptococcus_phage_SW15

TaxID: 2419635

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 92-181
PDB
Domain cluster: rep: MH375597.1__AXF53640.1__X__00024__D54-125
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF28149.1 best AcrIIA6 177.9 2.60e-52 97.8% 49.2%
D2 medium residues 1-91
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF28149.1 best AcrIIA6 195.9 7.70e-58 100.0% 50.8%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 48.0 5.50e-01 75.8% 100.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 57.0 5.92e-01 95.6% 97.6%
3veaA01 1.20.1270.380 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › MatP, N-terminal domain 0.59 48.0 4.85e-01 92.3% 91.0%
3ccgA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 40.0 3.26e-01 82.4% 81.5%
1szhA02 1.10.150.370 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain 0.53 40.0 4.16e-01 96.7% 91.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2420872 101.1.4.48 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › AcrIIA6 0.99 95.0 9.63e-01 98.9% 100.0%
4968599 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 55.0 6.03e-01 81.3% 96.0%
3617128 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.72 50.0 4.68e-01 72.5% 60.0%
2782 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.72 50.0 4.73e-01 72.5% 62.2%
3218304 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.70 49.0 4.84e-01 72.5% 82.1%
1032491 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.70 48.0 4.71e-01 72.5% 67.3%
3925208 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.69 48.0 4.82e-01 73.6% 73.7%
3926194 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.69 49.0 4.62e-01 74.7% 63.6%
3990388 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.55 43.0 3.75e-01 91.2% 54.5%
3735658 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.54 33.0 3.05e-01 78.0% 47.0%