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NC_071133.1__YP_010684818.1__PQZ60_gp73__00073

Bact-Vir

NC_071133.1__YP_010684818.1__PQZ60_gp73__00073

Identity

Accession:
NC_071133 ↗
Kingdom:
phage

Quality

71.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 80-148
PDB
Domain cluster: representative
CATH (82)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.81 61.0 5.63e-01 79.7% 70.1%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.78 59.0 5.53e-01 79.7% 68.7%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.73 46.0 4.42e-01 82.6% 55.0%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.73 65.0 6.04e-01 100.0% 87.5%
2wk1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 57.0 3.92e-01 98.6% 25.2%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 43.0 4.43e-01 81.2% 65.2%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 47.0 4.43e-01 84.1% 57.6%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.69 57.0 3.69e-01 91.3% 62.2%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 51.0 4.74e-01 88.4% 62.5%
3lcvB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 55.0 3.99e-01 97.1% 30.7%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.68 55.0 5.27e-01 98.6% 75.6%
1dctA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 55.0 4.18e-01 98.6% 36.4%
3dr5A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 60.0 4.23e-01 100.0% 34.7%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 45.0 4.02e-01 81.2% 48.0%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.67 55.0 5.26e-01 100.0% 77.1%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.67 53.0 5.29e-01 100.0% 85.7%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.67 58.0 4.43e-01 100.0% 79.6%
3zigA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.66 57.0 5.41e-01 100.0% 81.7%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.66 52.0 5.09e-01 100.0% 79.2%
3ssmC02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 59.0 4.16e-01 100.0% 38.4%
4annA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.66 46.0 3.42e-01 82.6% 29.0%
4bndA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.65 53.0 4.76e-01 88.4% 94.8%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.64 47.0 3.37e-01 81.2% 31.3%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.64 52.0 5.02e-01 88.4% 79.2%
3mczA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 55.0 3.83e-01 100.0% 34.6%
2v8pA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.63 45.0 3.82e-01 75.4% 78.3%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.63 50.0 4.50e-01 88.4% 61.5%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 55.0 3.94e-01 95.7% 36.7%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.62 45.0 3.93e-01 76.8% 52.8%
4ymhD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 52.0 3.70e-01 100.0% 37.2%
2wb6A00 3.90.1150.90 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.61 52.0 4.47e-01 98.6% 94.7%
1yrxC01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 46.0 4.10e-01 84.1% 82.7%
3fxtA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 48.0 4.43e-01 98.6% 66.7%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.61 52.0 3.56e-01 100.0% 27.4%
2phcB01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 47.0 4.49e-01 98.6% 71.1%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 47.0 4.62e-01 100.0% 80.0%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.86e-01 98.6% 98.4%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 42.0 3.85e-01 81.2% 54.8%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.18e-01 100.0% 63.3%
3ui3A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 40.0 3.63e-01 82.6% 49.0%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 52.0 5.10e-01 95.7% 96.0%
2ywmA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 52.0 4.37e-01 97.1% 95.7%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 43.0 3.61e-01 81.2% 46.2%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.59 37.0 3.66e-01 78.3% 59.5%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.58 46.0 4.16e-01 89.9% 70.7%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.58 41.0 3.75e-01 94.2% 55.3%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.03e-01 100.0% 63.7%
1wr8A02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.57 48.0 4.87e-01 92.8% 91.3%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 46.0 4.50e-01 92.8% 84.0%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 49.0 3.96e-01 100.0% 87.3%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.57 49.0 3.68e-01 100.0% 69.0%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 50.0 3.58e-01 100.0% 82.5%
2hf2B02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 49.0 4.27e-01 97.1% 91.6%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.57 49.0 3.35e-01 98.6% 31.5%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.25e-01 95.7% 84.0%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 49.0 4.34e-01 100.0% 81.6%
3ehgA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 47.0 3.97e-01 97.1% 100.0%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.56 45.0 4.56e-01 98.6% 93.0%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.43e-01 100.0% 77.9%
4r78A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 39.0 3.56e-01 78.3% 54.2%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.55 37.0 3.67e-01 78.3% 64.5%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 48.0 4.18e-01 100.0% 74.8%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.55 47.0 3.89e-01 94.2% 97.5%
4xpkA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 47.0 3.80e-01 100.0% 95.7%
1dd5A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.54 46.0 4.50e-01 95.7% 94.7%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 4.06e-01 100.0% 77.9%
4ofzA03 3.30.70.3080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 45.0 4.23e-01 98.6% 84.3%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.86e-01 100.0% 66.0%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.53 44.0 4.40e-01 100.0% 95.7%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 40.0 3.58e-01 84.1% 55.9%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 4.15e-01 97.1% 76.0%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 4.22e-01 100.0% 86.7%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.52 45.0 4.31e-01 100.0% 86.4%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.64e-01 100.0% 62.4%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.52 45.0 4.50e-01 98.6% 97.1%
1gkxA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 43.0 3.52e-01 100.0% 88.1%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 4.22e-01 97.1% 98.8%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.56e-01 100.0% 59.6%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 4.13e-01 100.0% 100.0%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.69e-01 94.2% 69.9%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.70e-01 100.0% 62.9%
3daoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 43.0 3.79e-01 98.6% 90.8%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4980798 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.84 61.0 5.92e-01 75.4% 73.3%
5035783 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.83 62.0 5.89e-01 78.3% 72.5%
4356055 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.81 59.0 5.78e-01 78.3% 70.7%
4959193 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.76 59.0 5.46e-01 81.2% 65.9%
4031829 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.76 58.0 5.51e-01 81.2% 72.5%
4089899 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.73 54.0 5.26e-01 78.3% 73.3%
4016271 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.72 64.0 5.89e-01 100.0% 80.0%
4514876 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.72 55.0 5.48e-01 81.2% 84.3%
4058951 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.72 52.0 5.10e-01 76.8% 72.0%
3918547 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 62.0 4.34e-01 100.0% 48.9%
4024171 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.70 61.0 5.52e-01 100.0% 73.7%
4771821 327.3.1.0 a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain 0.68 59.0 5.58e-01 100.0% 91.7%
5074515 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.68 58.0 5.36e-01 100.0% 73.3%
5080331 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 57.0 5.04e-01 97.1% 82.9%
4016097 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.67 57.0 4.90e-01 98.6% 60.0%
5008101 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.67 58.0 4.89e-01 94.2% 70.9%
4948041 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.67 56.0 5.40e-01 98.6% 81.2%
4959212 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.66 46.0 3.28e-01 81.2% 22.7%
4115819 304.48.1.48 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.65 49.0 3.66e-01 79.7% 34.7%
5078526 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.65 51.0 3.41e-01 87.0% 98.9%
5042418 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.65 55.0 5.27e-01 100.0% 82.5%
4555708 328.3.1.2 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.65 56.0 4.87e-01 100.0% 66.4%
3579956 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.65 55.0 5.49e-01 98.6% 98.6%
3727895 872.4.1.0 a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like 0.65 46.0 4.96e-01 75.4% 96.4%
4931854 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.65 56.0 4.55e-01 94.2% 96.0%
3494198 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.64 55.0 4.04e-01 97.1% 40.0%
3411130 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.64 56.0 4.86e-01 100.0% 64.5%
4411010 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.64 55.0 4.45e-01 97.1% 91.9%
2597170 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.63 53.0 3.83e-01 91.3% 43.8%
4978883 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.63 53.0 4.99e-01 100.0% 76.5%
5072410 306.6.1.6 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › GH3_C 0.62 51.0 4.69e-01 94.2% 68.9%
5041064 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.62 50.0 4.58e-01 89.9% 72.6%
4022139 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 56.0 5.29e-01 98.6% 83.7%
3760398 2003.1.5.134 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF4470+DUF4471 0.62 54.0 3.36e-01 100.0% 16.6%
4157268 6102.1.1.1 alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA 0.61 50.0 3.45e-01 88.4% 43.5%
3989947 6102.1.1.1 alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA 0.60 43.0 3.01e-01 76.8% 40.0%
3651024 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.60 46.0 3.98e-01 84.1% 94.5%
3967046 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.59 51.0 4.24e-01 100.0% 83.8%
3732238 246.2.1.19 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PGA_cap 0.59 49.0 3.19e-01 100.0% 33.2%
3785836 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.59 43.0 4.18e-01 79.7% 75.0%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 46.0 4.33e-01 98.6% 69.4%
4886685 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.59 42.0 2.98e-01 76.8% 41.4%
4996620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 4.67e-01 100.0% 87.8%
3407270 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.58 44.0 4.29e-01 81.2% 74.7%
5043133 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.57 49.0 4.23e-01 95.7% 63.6%
4388536 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.57 45.0 4.63e-01 100.0% 96.9%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.56 44.0 4.26e-01 100.0% 75.0%
4348647 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.56 44.0 4.47e-01 100.0% 90.0%
3249558 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.55 45.0 4.36e-01 92.8% 92.5%
2063291 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.55 47.0 3.96e-01 98.6% 62.1%
3512389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.50e-01 100.0% 92.9%
3489258 306.8.1.0 a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like 0.55 44.0 3.83e-01 92.8% 57.1%
3589015 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.54 48.0 3.77e-01 100.0% 90.3%
5041410 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.54 44.0 3.06e-01 94.2% 26.9%
3964784 7581.1.1.14 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Ketoacyl-synt_2 0.53 43.0 3.13e-01 95.7% 43.0%
5073308 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 4.04e-01 100.0% 77.5%
4640762 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 4.30e-01 100.0% 96.9%
4988619 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.53 44.0 4.41e-01 100.0% 95.7%
3928546 101.1.2.47 alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.53 46.0 4.06e-01 97.1% 73.0%
4942158 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.53 41.0 4.24e-01 97.1% 95.4%
4149931 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.53 42.0 4.19e-01 100.0% 90.0%
3988671 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.53 44.0 3.58e-01 100.0% 80.7%
3940330 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.53 42.0 4.05e-01 100.0% 78.3%
3962193 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 4.27e-01 100.0% 94.3%
3602137 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.53 45.0 4.11e-01 100.0% 74.7%
4025592 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.53 41.0 3.65e-01 100.0% 57.3%
2152083 101.1.2.47 alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.52 45.0 4.13e-01 97.1% 79.3%
3592665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 46.0 4.03e-01 98.6% 81.7%
4974536 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 4.08e-01 100.0% 95.4%
4978789 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 4.02e-01 100.0% 78.9%
3961625 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.52 42.0 3.50e-01 94.2% 87.4%
4186742 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.52 41.0 4.15e-01 100.0% 91.4%
4992669 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.52 41.0 4.00e-01 100.0% 81.2%
4941238 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 4.20e-01 100.0% 95.7%
4983445 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.51 39.0 3.98e-01 100.0% 87.1%
3923802 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.51 46.0 4.11e-01 100.0% 74.7%
3589868 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.51 42.0 3.42e-01 98.6% 84.6%
5068345 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 4.09e-01 100.0% 95.7%