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NC_071135.1__YP_010684124.1__PQZ62_gp48__00048
Bact-VirNC_071135.1__YP_010684124.1__PQZ62_gp48__00048
Identity
- Accession:
- NC_071135 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 2776813
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-66
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 46.0 | 3.16e-01 | 71.2% | 49.1% |
| 1m0wA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.66 | 40.0 | 3.20e-01 | 72.7% | 31.0% |
| 1xoiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.62 | 43.0 | 2.57e-01 | 72.7% | 52.4% |
| 4oifB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 42.0 | 2.60e-01 | 71.2% | 19.3% |
| 3aj3A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 41.0 | 2.77e-01 | 72.7% | 19.8% |
| 2br6A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 39.0 | 2.73e-01 | 72.7% | 22.9% |
| 3wqlA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.53 | 38.0 | 2.59e-01 | 75.8% | 91.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5011867 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.76 | 53.0 | 3.85e-01 | 72.7% | 69.0% |
| 4994780 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.74 | 51.0 | 3.49e-01 | 71.2% | 64.2% |
| 4931921 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.72 | 50.0 | 3.88e-01 | 72.7% | 35.7% |
| 4561209 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.71 | 49.0 | 3.88e-01 | 72.7% | 37.0% |
| 3515353 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.69 | 48.0 | 4.30e-01 | 72.7% | 77.8% |
| 3271694 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.66 | 47.0 | 3.17e-01 | 74.2% | 31.9% |